BLASTX 7.6.2
Query= RU25415 /QuerySize=159
(158 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15242694|ref|NP_201131.1| zinc finger (CCCH-type) family prot... 75 2e-012
gi|55819798|gb|AAV66094.1| At5g63260 [Arabidopsis thaliana] 75 2e-012
gi|157342064|emb|CAO64177.1| unnamed protein product [Vitis vini... 75 2e-012
gi|15228379|ref|NP_190414.1| zinc finger (CCCH-type) family prot... 71 3e-011
gi|157345343|emb|CAO14641.1| unnamed protein product [Vitis vini... 65 1e-009
>gi|15242694|ref|NP_201131.1| zinc finger (CCCH-type) family protein
[Arabidopsis thaliana]
Length = 435
Score = 75 bits (182), Expect = 2e-012
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +3
Query: 6 INNSGTETNVYKQYPPSNQVDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+NNS ET+ + QY V+EFPERP QP C+++L+TGDCKFK CKYHH
Sbjct: 309 VNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHH 359
>gi|55819798|gb|AAV66094.1| At5g63260 [Arabidopsis thaliana]
Length = 435
Score = 75 bits (182), Expect = 2e-012
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +3
Query: 6 INNSGTETNVYKQYPPSNQVDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+NNS ET+ + QY V+EFPERP QP C+++L+TGDCKFK CKYHH
Sbjct: 309 VNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHH 359
>gi|157342064|emb|CAO64177.1| unnamed protein product [Vitis vinifera]
Length = 478
Score = 75 bits (182), Expect = 2e-012
Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Frame = +3
Query: 9 NNSGTETNVYKQYPPSNQ--VDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
NN+ T+ NVY + Q +++FPERPGQP CS+FL+TGDCKF++ CKYHH
Sbjct: 333 NNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYHH 384
>gi|15228379|ref|NP_190414.1| zinc finger (CCCH-type) family protein
[Arabidopsis thaliana]
Length = 448
Score = 71 bits (172), Expect = 3e-011
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 6 INNSGTETN-VYKQYPPSNQVDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+NNS ET+ + QY +EFPERP QP CS++++TGDCKFK NCKYHH
Sbjct: 320 MNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHH 371
>gi|157345343|emb|CAO14641.1| unnamed protein product [Vitis vinifera]
Length = 328
Score = 65 bits (157), Expect = 1e-009
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = +3
Query: 42 QYPPSNQVDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
Q+ QV+EFPERPG+P C +F++TGDCK+KS C+YHH
Sbjct: 200 QHYEQTQVEEFPERPGKPECDYFMKTGDCKYKSACRYHH 238
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
|