BLASTX 7.6.2
Query= RU25623 /QuerySize=677
(676 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|22331274|ref|NP_188962.2| basic helix-loop-helix (bHLH) famil... 160 9e-038
gi|20127030|gb|AAM10939.1|AF488573_1 putative bHLH transcription... 160 9e-038
gi|30682847|ref|NP_849383.1| basic helix-loop-helix (bHLH) famil... 154 8e-036
gi|168052914|ref|XP_001778884.1| predicted protein [Physcomitrel... 147 8e-034
gi|116784038|gb|ABK23190.1| unknown [Picea sitchensis] 141 4e-032
>gi|22331274|ref|NP_188962.2| basic helix-loop-helix (bHLH) family protein
[Arabidopsis thaliana]
Length = 320
Score = 160 bits (404), Expect = 9e-038
Identities = 83/123 (67%), Positives = 98/123 (79%)
Frame = +1
Query: 289 IEFSANSGVAAPSQTQEKQCPRKRGRTESWSGSGAKACREKLRRERLNDKFGDLSAVLEP 468
+E +++S V A + E++C KR RT S S G KACREKLRRE+LNDKF DLS+VLEP
Sbjct: 132 VEINSSSSVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEP 191
Query: 469 GRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEKLLEEIKSLKAEKNELREEKVVLKAD 648
GR KTDK AILD AI V+ QLR EAHEL +TN+KLLEEIKSLKA+KNELREEK+VLKA+
Sbjct: 192 GRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAE 251
Query: 649 KRK 657
K K
Sbjct: 252 KEK 254
>gi|20127030|gb|AAM10939.1|AF488573_1 putative bHLH transcription factor
[Arabidopsis thaliana]
Length = 291
Score = 160 bits (404), Expect = 9e-038
Identities = 83/123 (67%), Positives = 98/123 (79%)
Frame = +1
Query: 289 IEFSANSGVAAPSQTQEKQCPRKRGRTESWSGSGAKACREKLRRERLNDKFGDLSAVLEP 468
+E +++S V A + E++C KR RT S S G KACREKLRRE+LNDKF DLS+VLEP
Sbjct: 103 VEINSSSSVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEP 162
Query: 469 GRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEKLLEEIKSLKAEKNELREEKVVLKAD 648
GR KTDK AILD AI V+ QLR EAHEL +TN+KLLEEIKSLKA+KNELREEK+VLKA+
Sbjct: 163 GRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAE 222
Query: 649 KRK 657
K K
Sbjct: 223 KEK 225
>gi|30682847|ref|NP_849383.1| basic helix-loop-helix (bHLH) family protein
[Arabidopsis thaliana]
Length = 277
Score = 154 bits (387), Expect = 8e-036
Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 4/128 (3%)
Frame = +1
Query: 286 EIEFSANSGVAAPSQTQE---KQCPRKRGRTESWS-GSGAKACREKLRRERLNDKFGDLS 453
E+E ++ S A + QE C RKR RT S S G G KACRE+LRRE+LN++F DLS
Sbjct: 89 EVEINSGSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLS 148
Query: 454 AVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEKLLEEIKSLKAEKNELREEKV 633
+VLEPGR KTDKPAILD AI +L QLR EA +L +TN+KLLEEIKSLKAEKNELREEK+
Sbjct: 149 SVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKL 208
Query: 634 VLKADKRK 657
VLKADK K
Sbjct: 209 VLKADKEK 216
>gi|168052914|ref|XP_001778884.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 238
Score = 147 bits (370), Expect = 8e-034
Identities = 81/142 (57%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Frame = +1
Query: 235 EPQFPNFLWSNPSPSFPEIEFSA-NSGVAAPSQTQEKQCPRKRGRTESWSGSGAKACREK 411
+P P F W +I+ S N S EK C RKR R E SGSG KACREK
Sbjct: 26 QPSNP-FFWCTTQQPVEQIDCSIDNECSKGESDVPEKSCSRKRSREEGSSGSGNKACREK 84
Query: 412 LRRERLNDKFGDLSAVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEKLLEEIK 591
+RR+RLND+F DLSA LEPGRP KTDK IL A+ +LTQLRAEA LT++N +L E IK
Sbjct: 85 MRRDRLNDRFLDLSAALEPGRPPKTDKATILSDAVRILTQLRAEAQGLTESNNQLRETIK 144
Query: 592 SLKAEKNELREEKVVLKADKRK 657
LK EKNELREEK LKADK +
Sbjct: 145 DLKNEKNELREEKTRLKADKER 166
>gi|116784038|gb|ABK23190.1| unknown [Picea sitchensis]
Length = 238
Score = 141 bits (355), Expect = 4e-032
Identities = 77/145 (53%), Positives = 98/145 (67%), Gaps = 3/145 (2%)
Frame = +1
Query: 229 IDEPQFPNFLWSNPS-PSFPEIEFSAN-SGVAAPSQTQEKQCPRKRGRTESWSGSGAKAC 402
+ +P P F W P P++ S G QEK CPRKR R ES G G+KAC
Sbjct: 23 VGQPANP-FFWCGPGINDQPDVSGSVEIDGSNKDIDEQEKLCPRKRPREESSGGPGSKAC 81
Query: 403 REKLRRERLNDKFGDLSAVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEKLLE 582
REK+RR+RLND+F +LS+VLEPGRP KTDK IL A V++QLRA+A +L ++N+ L E
Sbjct: 82 REKMRRDRLNDRFMELSSVLEPGRPPKTDKATILSDAARVMSQLRADAQKLKESNDHLQE 141
Query: 583 EIKSLKAEKNELREEKVVLKADKRK 657
IK LKAEKNELR+EK+ LKA+K +
Sbjct: 142 TIKDLKAEKNELRDEKLRLKAEKER 166
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0
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