Blast details for RU25720 (GenBank)


BLASTX 7.6.2

Query= RU25720 /QuerySize=316
        (315 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|156145914|gb|ABU53684.1| myb transcription factor [Rosa hybri...    137   2e-031
gi|28629811|gb|AAO45179.1| transcription factor Myb1 [Malus xiao...     86   5e-016
gi|110931724|gb|ABH02861.1| MYB transcription factor MYB183 [Gly...     58   2e-007

>gi|156145914|gb|ABU53684.1| myb transcription factor [Rosa hybrid cultivar]

          Length = 294

 Score =  137 bits (344), Expect = 2e-031
 Identities = 65/81 (80%), Positives = 66/81 (81%)
 Frame = +1

Query:  40 ATPMEEEQVHHQDNTSHLHSLPPPPPQSESCNPNGFSMVPIFPMNVGPAVVQVATKKPTG 219
           ATPMEEEQVHHQDNTSHLHSLPPPPPQSESCNPNGFSMVPIFPMNVGPAVVQ    +   
Sbjct: 154 ATPMEEEQVHHQDNTSHLHSLPPPPPQSESCNPNGFSMVPIFPMNVGPAVVQSRHYRNNR 213

Query: 220 NLKLGQGNPGCPSPKIVHPVA 282
             K G    G PSPKIVHPVA
Sbjct: 214 KSKTGTRKSGVPSPKIVHPVA 234

>gi|28629811|gb|AAO45179.1| transcription factor Myb1 [Malus xiaojinensis]

          Length = 302

 Score =  86 bits (212), Expect = 5e-016
 Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
 Frame = +1

Query:  43 TPMEEEQVHHQDN--TSHLHSLPPPPPQSESCNPNGFSMVPIFPMNVGPAVVQVATKKPT 216
           TPM+EEQV HQDN   S LH LPPPPP SE  +  GFSMVP F   VGPAV+ V  + P 
Sbjct: 161 TPMDEEQVQHQDNISQSQLHPLPPPPP-SEPRDAGGFSMVPNFARTVGPAVLPVHIENPM 219

Query: 217 GNLKLGQGNP-GCPSPKIVHPVA 282
            NL L Q NP    S K+VHPVA
Sbjct: 220 ENLALRQANPENSTSAKLVHPVA 242

>gi|110931724|gb|ABH02861.1| MYB transcription factor MYB183 [Glycine max]

          Length = 294

 Score =  58 bits (138), Expect = 2e-007
 Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
 Frame = +1

Query:  43 TPMEE-EQVHHQDNTSHLHSLPPPPPQSESCNPNGFSMVPIFPMNVGPAVVQVATKKPTG 219
           TPMEE  Q+ HQDN S  H + P  P  E  N NGF  + ++P +VG  V+ V    P  
Sbjct: 152 TPMEEGVQIQHQDNVSLFHPVYPVTP--EGSNMNGFPKMSMYPKDVGSGVMSVQAGNPME 209

Query: 220 NLKLGQGN--PGCPSPKIV 270
            L LGQGN     PS K+V
Sbjct: 210 TLTLGQGNVEQNGPSTKLV 228

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,304,915,632
Number of Sequences: 7387702
Number of Extensions: 544304915632
Number of Successful Extensions: 309755150
Number of sequences better than 0.0: 0