BLASTX 7.6.2
Query= RU25918 /QuerySize=1348
(1347 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118482842|gb|ABK93336.1| unknown [Populus trichocarpa] 500 1e-139
gi|157348666|emb|CAO23558.1| unnamed protein product [Vitis vini... 495 6e-138
gi|124360202|gb|ABN08215.1| Zinc finger, CCCH-type [Medicago tru... 468 5e-130
gi|28273376|gb|AAO38462.1| unknown protein [Oryza sativa (japoni... 429 4e-118
gi|115454763|ref|NP_001050982.1| Os03g0698800 [Oryza sativa (jap... 429 4e-118
>gi|118482842|gb|ABK93336.1| unknown [Populus trichocarpa]
Length = 710
Score = 500 bits (1286), Expect = 1e-139
Identities = 248/315 (78%), Positives = 268/315 (85%), Gaps = 3/315 (0%)
Frame = -2
Query: 947 TQRRRNIRTIPSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRD 768
T ++ PSLPDIKN RMFS KVRP SRAYSHDWTECPFVH GENARRRD
Sbjct: 222 TPEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRD 281
Query: 767 PRKFHYSCVPCPEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFA 588
PRKFHYSCVPCP+FRKGACRRG MCEYAHGVFECWLHPAQYRTRLCKDGTSCNR+VCFFA
Sbjct: 282 PRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRQVCFFA 341
Query: 587 HTTDELRPLYVSTGSAVPSPRSSASGPTVMDMAAALSLLPGSPSSVSAMSPSPFSQSMSP 408
HT +ELRPLYVSTGSA+PSPRSS S +VMDMAAALSLLPGSPSSVSAMSP+PF+Q MSP
Sbjct: 342 HTPEELRPLYVSTGSAIPSPRSSQSAASVMDMAAALSLLPGSPSSVSAMSPTPFNQPMSP 401
Query: 407 SANGISQSSVAWPHPNVPTLHLPGSNLQSSRLRSSLSARDIPPENLNLLRELDAQQQLLN 228
ANGIS SS+AWP PNVPTLHLPGSN QSSRLRSS SARDIPPE+ NLL + D+QQQ+LN
Sbjct: 402 -ANGISHSSMAWPQPNVPTLHLPGSNFQSSRLRSSFSARDIPPEDFNLLPDFDSQQQILN 460
Query: 227 ELNCFSQPRPSPISVGRSGRSKTLTPSNLEELFSAEFSSSPRFSDHTAASVFSPTHKSAV 48
+L CFSQ + + S RSG SKTL PSNLEELF+AE SSPRF+D AA+VFSPTHKSA
Sbjct: 461 DLTCFSQSQNNSASFSRSGWSKTLNPSNLEELFTAEM-SSPRFADQ-AAAVFSPTHKSAY 518
Query: 47 LNQFQQQQSMLSPIN 3
LNQ QQQQSMLSPIN
Sbjct: 519 LNQLQQQQSMLSPIN 533
>gi|157348666|emb|CAO23558.1| unnamed protein product [Vitis vinifera]
Length = 703
Score = 495 bits (1272), Expect = 6e-138
Identities = 243/307 (79%), Positives = 266/307 (86%), Gaps = 3/307 (0%)
Frame = -2
Query: 917 PSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVP 738
PSLPDIKN RMFS KVRP SRAYSHDWTECPFVH GENARRRDPRKFHYSCVP
Sbjct: 220 PSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVP 279
Query: 737 CPEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLY 558
CP+FRKGACRRG MCEYAHGVFECWLHPAQYRTRLCKDGT+CNRRVCFFAHTT+ELRPLY
Sbjct: 280 CPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCNRRVCFFAHTTEELRPLY 339
Query: 557 VSTGSAVPSPRSSASGPTVMDMAAALSLLPGSPSSVSAMSPSPFSQSMSPSANGISQSSV 378
+STGSAVPSPR S+S T MD A A++L+PGSPSSVS MSPSPF+ +SPSANG+S SS+
Sbjct: 340 MSTGSAVPSPRPSSSTATAMDFATAMNLIPGSPSSVSVMSPSPFTPPLSPSANGVSHSSM 399
Query: 377 AWPHPNVPTLHLPGSNLQSSRLRSSLSARDIPPENLNLLRELDAQQ-QLLNELNCFSQPR 201
W PNVPTLHLPGSNLQSSRLRSSL+ARDIP E++NL+ + D QQ QLLNEL+C SQP
Sbjct: 400 GWAQPNVPTLHLPGSNLQSSRLRSSLNARDIPAEDINLMLDFDIQQHQLLNELSCLSQPC 459
Query: 200 PSPISVGRSGRSKTLTPSNLEELFSAEFSSSPRFSDHTAAS-VFSPTHKSAVLNQFQQQQ 24
+ S+ RSGRSKTLTPSNL+ELFSAE SSSPR+SD AS V+SPTHKSAVLNQFQQQQ
Sbjct: 460 VNSNSLNRSGRSKTLTPSNLDELFSAE-SSSPRYSDQALASAVYSPTHKSAVLNQFQQQQ 518
Query: 23 SMLSPIN 3
SMLSPIN
Sbjct: 519 SMLSPIN 525
>gi|124360202|gb|ABN08215.1| Zinc finger, CCCH-type [Medicago truncatula]
Length = 734
Score = 468 bits (1204), Expect = 5e-130
Identities = 234/330 (70%), Positives = 266/330 (80%), Gaps = 4/330 (1%)
Frame = -2
Query: 989 LLLLQSLLSCLLILTQRRRNIRTIPSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTE 810
LL L+S+ L ++ PSLPDIKN RM+S KVRP SRAYSHDWTE
Sbjct: 226 LLKLKSIDVPLSPAGSEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTE 285
Query: 809 CPFVH.GENARRRDPRKFHYSCVPCPEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLC 630
CPFVH GENARRRDPRK+HYSCVPCP+FRKGACRRG MCEYAHGVFECWLHPAQYRTRLC
Sbjct: 286 CPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLC 345
Query: 629 KDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRSSASGPTVMDMAAALSLLPGSPSSV 450
KDGT+C+RRVCFFAHT +ELRPLYVSTGSAVPSPRSS S + MD AAA+S+LPGSPSS+
Sbjct: 346 KDGTNCSRRVCFFAHTPEELRPLYVSTGSAVPSPRSSTS--SAMDFAAAMSMLPGSPSSM 403
Query: 449 SAMSPSPFSQSMSPSANGISQSSVAWPHPNVPTLHLPGSNLQSSRLRSSLSARDIPPENL 270
S MSPSPF+ MSPS NGIS +SVAWP PN+P LHLPGSNLQSSRLRSSL+ARDI ++
Sbjct: 404 SVMSPSPFTPPMSPSGNGISHNSVAWPQPNIPALHLPGSNLQSSRLRSSLNARDIHMDDF 463
Query: 269 NLLRELDAQQQLLNELNCFSQPRPSPISVGRSGRSKTLTPSNLEELFSAEFSSSPRFSD- 93
LL + D QQQLLNEL C S + S+ RSGR K L PSNL++LFSAE SSSPR++D
Sbjct: 464 ELLSDYDQQQQLLNELACLSPRHINSNSLSRSGRMKPLNPSNLDDLFSAE-SSSPRYADP 522
Query: 92 HTAASVFSPTHKSAVLNQFQQQQSMLSPIN 3
+ ++VFSPTHKSAV NQFQQQQ+MLSP+N
Sbjct: 523 NLTSTVFSPTHKSAVFNQFQQQQNMLSPVN 552
>gi|28273376|gb|AAO38462.1| unknown protein [Oryza sativa (japonica
cultivar-group)]
Length = 749
Score = 429 bits (1101), Expect = 4e-118
Identities = 213/318 (66%), Positives = 257/318 (80%), Gaps = 10/318 (3%)
Frame = -2
Query: 953 ILTQRRRNIRTIPSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARR 774
++T ++ PSLPDIKN RM+S K+RP SRAYSHDWTECPFVH GENARR
Sbjct: 240 VVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARR 299
Query: 773 RDPRKFHYSCVPCPEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCF 594
RDPRK+HYSCVPCP+FRKG CRRG MCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCF
Sbjct: 300 RDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCF 359
Query: 593 FAHTTDELRPLYVSTGSAVPSPRSSASGPTVMDMAAALSLLPGSPSSVSAMSPSPFSQSM 414
FAHTTDELRPLYVSTGSAVPSPR+SA+ M+MAAA+ L+PGSPSSVSA+ SPF+ M
Sbjct: 360 FAHTTDELRPLYVSTGSAVPSPRASAT--ATMEMAAAMGLMPGSPSSVSAVM-SPFTPPM 416
Query: 413 SPSANGISQSSVAWPHPNVPTLHLPGSNLQSSRLRSSLSARDIPPENLNLLRELDAQQQL 234
SPS NG+ S+ W PNVPTLHLPGS+LQSSRLR+SLSARD+P ++ +L++++D+ QL
Sbjct: 417 SPSGNGM-PPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSLMQDIDS--QL 473
Query: 233 LNELNCFSQPRPSPISVGRSGRSKTLTPSNLEELFSAEFSSSPRFSDHTAASVFSPTHKS 54
+N+L C+S R + + R+K+L PSNL++LFSAE SSPR+S+ +FSP+HK+
Sbjct: 474 INDL-CYS--RIGSSTGNHTSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFSPSHKA 530
Query: 53 AVLNQF-QQQQSMLSPIN 3
A LNQF QQQQ++LSPIN
Sbjct: 531 AFLNQFQQQQQALLSPIN 548
>gi|115454763|ref|NP_001050982.1| Os03g0698800 [Oryza sativa (japonica
cultivar-group)]
Length = 764
Score = 429 bits (1101), Expect = 4e-118
Identities = 213/318 (66%), Positives = 257/318 (80%), Gaps = 10/318 (3%)
Frame = -2
Query: 953 ILTQRRRNIRTIPSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARR 774
++T ++ PSLPDIKN RM+S K+RP SRAYSHDWTECPFVH GENARR
Sbjct: 255 VVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARR 314
Query: 773 RDPRKFHYSCVPCPEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCF 594
RDPRK+HYSCVPCP+FRKG CRRG MCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCF
Sbjct: 315 RDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCF 374
Query: 593 FAHTTDELRPLYVSTGSAVPSPRSSASGPTVMDMAAALSLLPGSPSSVSAMSPSPFSQSM 414
FAHTTDELRPLYVSTGSAVPSPR+SA+ M+MAAA+ L+PGSPSSVSA+ SPF+ M
Sbjct: 375 FAHTTDELRPLYVSTGSAVPSPRASAT--ATMEMAAAMGLMPGSPSSVSAVM-SPFTPPM 431
Query: 413 SPSANGISQSSVAWPHPNVPTLHLPGSNLQSSRLRSSLSARDIPPENLNLLRELDAQQQL 234
SPS NG+ S+ W PNVPTLHLPGS+LQSSRLR+SLSARD+P ++ +L++++D+ QL
Sbjct: 432 SPSGNGM-PPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSLMQDIDS--QL 488
Query: 233 LNELNCFSQPRPSPISVGRSGRSKTLTPSNLEELFSAEFSSSPRFSDHTAASVFSPTHKS 54
+N+L C+S R + + R+K+L PSNL++LFSAE SSPR+S+ +FSP+HK+
Sbjct: 489 INDL-CYS--RIGSSTGNHTSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFSPSHKA 545
Query: 53 AVLNQF-QQQQSMLSPIN 3
A LNQF QQQQ++LSPIN
Sbjct: 546 AFLNQFQQQQQALLSPIN 563
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 550,909,531,809
Number of Sequences: 7387702
Number of Extensions: 550909531809
Number of Successful Extensions: 317285675
Number of sequences better than 0.0: 0
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