BLASTX 7.6.2
Query= RU26017 /QuerySize=833
(832 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157352504|emb|CAO43610.1| unnamed protein product [Vitis vini... 413 1e-113
gi|147856398|emb|CAN82466.1| hypothetical protein [Vitis vinifera] 389 2e-106
gi|22329999|ref|NP_175010.2| polypyrimidine tract-binding protei... 372 2e-101
gi|28949889|emb|CAD70621.1| polypyrimidine track-binding protein... 370 8e-101
gi|145324168|ref|NP_001077673.1| polypyrimidine tract-binding pr... 361 5e-098
>gi|157352504|emb|CAO43610.1| unnamed protein product [Vitis vinifera]
Length = 443
Score = 413 bits (1060), Expect = 1e-113
Identities = 203/230 (88%), Positives = 216/230 (93%), Gaps = 1/230 (0%)
Frame = +2
Query: 143 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQF 322
MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QMQD +A +A+QF
Sbjct: 1 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60
Query: 323 YANVQPAVRGRNVYVQFSPHQELTTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQV 502
Y NVQP++RGRNVYVQFS HQELTT+ QNAQGRGDEPNRILLVT+HH+LYPITVEVLHQV
Sbjct: 61 YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGDEPNRILLVTIHHLLYPITVEVLHQV 120
Query: 503 FFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDEL 682
F PHGFVEKIVTFQKSAGFQALIQYQSRQSAVAAR +LQGRNIYDGCCQLDIQFSNLDEL
Sbjct: 121 FSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFSNLDEL 180
Query: 683 QVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGLQATGARAVGFP 832
QVNYNNERSRDFTNP+LPSEQKG+S Q GYGD+GGMY LQ GAR VGFP
Sbjct: 181 QVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQ-PGARTVGFP 229
>gi|147856398|emb|CAN82466.1| hypothetical protein [Vitis vinifera]
Length = 476
Score = 389 bits (997), Expect = 2e-106
Identities = 197/229 (86%), Positives = 209/229 (91%), Gaps = 4/229 (1%)
Frame = +2
Query: 143 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQF 322
MTEPSKVIHVRNVG EISENDLLQL PFGV+TKLVMLRAKNQAL+QMQD A+AVSALQ+
Sbjct: 1 MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60
Query: 323 YANVQPAVRGRNVYVQFSPHQELTTMYQNAQGR-GD---EPNRILLVTVHHMLYPITVEV 490
YANVQP+VRGRNVYVQFS HQELTTM QN+QGR GD +PNRILLVT+HH+LYPITVEV
Sbjct: 61 YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPNRILLVTIHHLLYPITVEV 120
Query: 491 LHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSN 670
LHQVF PHGFVEKIVTFQKSAGFQALIQYQSRQSAV+A ALQGRNIYDGCCQLDIQFSN
Sbjct: 121 LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFSN 180
Query: 671 LDELQVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGLQATGAR 817
L ELQVNYNNERSRDFTNP+LPSEQKG+S Q GYGD GGMY LQ GAR
Sbjct: 181 LTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGAR 229
>gi|22329999|ref|NP_175010.2| polypyrimidine tract-binding protein, putative /
heterogeneous nuclear ribonucleoprotein, putative [Arabidopsis
thaliana]
Length = 432
Score = 372 bits (954), Expect = 2e-101
Identities = 184/230 (80%), Positives = 203/230 (88%), Gaps = 1/230 (0%)
Frame = +2
Query: 143 MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQF 322
M E SKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QMQD ++AVSALQF
Sbjct: 1 MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60
Query: 323 YANVQPAVRGRNVYVQFSPHQELTTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQV 502
+ NVQP +RGRNVYVQFS HQELTT+ QN GR DEPNRILLVT+HHMLYPITV+VLHQV
Sbjct: 61 FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV 120
Query: 503 FFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDEL 682
F P+GFVEK+VTFQKSAGFQALIQYQ +Q A +ARTALQGRNIYDGCCQLDIQFSNL+EL
Sbjct: 121 FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL 180
Query: 683 QVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGLQA-TGARAVGF 829
QVNYNN+RSRD+TNPNLP+EQKG+S P YGD+G Y A T A A F
Sbjct: 181 QVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAF 230
>gi|28949889|emb|CAD70621.1| polypyrimidine track-binding protein homologue
[Cicer arietinum]
Length = 442
Score = 370 bits (949), Expect = 8e-101
Identities = 184/227 (81%), Positives = 205/227 (90%), Gaps = 2/227 (0%)
Frame = +2
Query: 149 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYA 328
EPSKVIHVRNVGHEISENDLLQLFQ FGVITKLVMLR KNQAL+QM+D +A+SALQFYA
Sbjct: 3 EPSKVIHVRNVGHEISENDLLQLFQTFGVITKLVMLRTKNQALLQMEDIPSAISALQFYA 62
Query: 329 NVQPAVRGRNVYVQFSPHQELTTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQVFF 508
N QP++RGRNVYVQFS H+ELTTM Q +QGR DEPNRILLVTVH M YPITV+VL QVF
Sbjct: 63 NAQPSIRGRNVYVQFSSHKELTTMDQ-SQGRDDEPNRILLVTVHQMQYPITVDVLQQVFS 121
Query: 509 PHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQV 688
PHG+VEKIVTFQKSAGFQALIQY+SRQSAV AR++LQGRNIYDGCCQLDIQFSNLDELQV
Sbjct: 122 PHGYVEKIVTFQKSAGFQALIQYESRQSAVTARSSLQGRNIYDGCCQLDIQFSNLDELQV 181
Query: 689 NYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGLQATGARAVGF 829
NYNN+RSRD+TNPNLP+EQKG+ GYGD+ GM+G+Q +GAR GF
Sbjct: 182 NYNNDRSRDYTNPNLPTEQKGRPSHSGYGDT-GMHGVQGSGARPGGF 227
>gi|145324168|ref|NP_001077673.1| polypyrimidine tract-binding protein, putative
/ heterogeneous nuclear ribonucleoprotein, putative [Arabidopsis
thaliana]
Length = 430
Score = 361 bits (925), Expect = 5e-098
Identities = 181/228 (79%), Positives = 200/228 (87%), Gaps = 3/228 (1%)
Frame = +2
Query: 149 EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQFYA 328
E SKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QMQD ++AVSALQF+
Sbjct: 3 ESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQFFT 62
Query: 329 NVQPAVRGRNVYVQFSPHQELTTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQVFF 508
NVQP + RNVYVQFS HQELTT+ QN GR DEPNRILLVT+HHMLYPITV+VLHQVF
Sbjct: 63 NVQPTI--RNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQVFS 120
Query: 509 PHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQV 688
P+GFVEK+VTFQKSAGFQALIQYQ +Q A +ARTALQGRNIYDGCCQLDIQFSNL+ELQV
Sbjct: 121 PYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEELQV 180
Query: 689 NYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGLQA-TGARAVGF 829
NYNN+RSRD+TNPNLP+EQKG+S P YGD+G Y A T A A F
Sbjct: 181 NYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAF 228
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 550,909,531,809
Number of Sequences: 7387702
Number of Extensions: 550909531809
Number of Successful Extensions: 317285675
Number of sequences better than 0.0: 0
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