BLASTX 7.6.2
Query= RU26080 /QuerySize=369
(368 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|211964614|gb|EEA99809.1| zinc finger (C3HC4 type RING finger)... 55 9e-007
gi|114585518|ref|XP_516298.2| PREDICTED: similar to TPRXL protei... 55 1e-006
gi|154344451|ref|XP_001568167.1| proteophosphoglycan ppg4 [Leish... 54 3e-006
>gi|211964614|gb|EEA99809.1| zinc finger (C3HC4 type RING finger) protein,
putative [Toxoplasma gondii ME49]
Length = 780
Score = 55 bits (132), Expect = 9e-007
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = -3
Query: 291 SAIAATSESTSPNPPRTTSFRFSTASGESSSSATSAWPASNPPSSAPTASTTRRPATASL 112
S + S +S + + S S+ S + SS++S+ P+S+ PSSAP++S + ++AS+
Sbjct: 509 SPLRPPSSCSSSSSSSSASSSSSSPSSSAPSSSSSSSPSSSAPSSAPSSSPSSSSSSASV 568
Query: 111 AASAGGESTGTAIPSTAAPPSGPGRRLRPPTRSLSA 4
+A+A E + PS PP G G PP + +A
Sbjct: 569 SAAASEEGSSRRPPSRVPPPPGAGGGAAPPKKRQTA 604
>gi|114585518|ref|XP_516298.2| PREDICTED: similar to TPRXL protein [Pan
troglodytes]
Length = 215
Score = 55 bits (131), Expect = 1e-006
Identities = 32/98 (32%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = -3
Query: 291 SAIAATSESTSPNPPRTTSFRFSTASGESSSSATSAWPASNPPSSAPTA-STTRRPATAS 115
S+ +++ S+SP+ ++S S +S SSSS++S+ P+S+ PSS+ ++ S++ P+++S
Sbjct: 116 SSSSSSPSSSSPSSSSSSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSSSPSSSS 175
Query: 114 LAASAGGESTGTAIPSTAAPPSGPGRRLRPPTRSLSAP 1
+ S S ++ PS++ P + GRR + P S AP
Sbjct: 176 SSPSPSSSSPSSSSPSSSRPSAALGRRPQSPQSSHCAP 213
>gi|154344451|ref|XP_001568167.1| proteophosphoglycan ppg4 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 5384
Score = 54 bits (127), Expect = 3e-006
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Frame = -3
Query: 345 RRR---AVRRRRRLGSCRT*RSAIAATSESTSPNPPRTTSFRFSTASGESSSSATSAWPA 175
RRR A RRRRR R R A A+ S S+S P ++S S++S SSS+++ +
Sbjct: 4621 RRRPAAAPRRRRRRRRRRRRRPAAASPSSSSSSPPTSSSSAPSSSSSSAPSSSSSAPSSS 4680
Query: 174 SNPPSSAPTASTTRRPATASLAASAGGESTGTAIPSTAAPPSGPGRRLRPPTRSLSAP 1
S+ PSS+ +A ++ + S ++SA S+ +A S+++ PS P+ S SAP
Sbjct: 4681 SSAPSSSSSAPSSSSSSAPSSSSSAPSSSSSSAPSSSSSAPSSSSS--SAPSSSSSAP 4736
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 550,909,531,809
Number of Sequences: 7387702
Number of Extensions: 550909531809
Number of Successful Extensions: 317285675
Number of sequences better than 0.0: 0
|