BLASTX 7.6.2
Query= RU26145 /QuerySize=1112
(1111 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157340866|emb|CAO47671.1| unnamed protein product [Vitis vini... 361 1e-097
gi|164605002|dbj|BAF98297.1| 4-hydroxy-3-methylbut-2-enyl diphos... 357 9e-097
gi|195928050|gb|ACG55683.1| 4-hydroxy-3-methylbut-2-enyl diphosp... 356 3e-096
gi|189017050|gb|ACD70402.1| putative chloroplast 4-hydroxy-3-met... 350 1e-094
gi|157042741|gb|ABV02022.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-d... 342 5e-092
>gi|157340866|emb|CAO47671.1| unnamed protein product [Vitis vinifera]
Length = 465
Score = 361 bits (924), Expect = 1e-097
Identities = 203/338 (60%), Positives = 241/338 (71%), Gaps = 30/338 (8%)
Frame = +2
Query: 116 PHSLAGSVCFRSRNSLSVKCSGD------SSAAVESDFDAKVFRKNLTRSKNYNRRGFGP 277
P + AG FR R LSV+CSG+ SS AV+SDFDAKVFR NLTRSKNYNR+GFG
Sbjct: 19 PEAFAGIGVFRRRKPLSVRCSGESESSSSSSVAVDSDFDAKVFRHNLTRSKNYNRKGFG- 77
Query: 278 *GRDPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRG-VRVLLGR*ASRADCLRGQKA 454
H+ + E + ++ L + E + G V V L + C ++A
Sbjct: 78 -------HKDETLELMNREYTSDIIKT-LKENGNEYKWGNVTVKLAE--AYGFCWGVERA 127
Query: 455 ISS*EDLDYQRD-----------HSQSDRQ*EVGGDGGENIPIEEGRKQFEVVDKGDVVI 601
+ + Q H+ + Q + ++IPI++G+KQFEVVDKGDVVI
Sbjct: 128 VQIAYEARKQFPEEKIWITNEIIHNPTVNQ-RLAEMEVKDIPIDDGQKQFEVVDKGDVVI 186
Query: 602 LPAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHEETVAT 781
LPAFGAAVDEML+LS++NVQIVDTTCPWVSKVWN VEKHKKG+YTSIIHGKY+HEET+AT
Sbjct: 187 LPAFGAAVDEMLTLSNKNVQIVDTTCPWVSKVWNIVEKHKKGEYTSIIHGKYSHEETIAT 246
Query: 782 ASFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPDRDLIKCG 961
ASFAGKY+IVKNM EA YVCDYILGGEL+GSSSTRE F EKFK A+S GFDPD DL K G
Sbjct: 247 ASFAGKYIIVKNMAEAMYVCDYILGGELDGSSSTREEFFEKFKFAISEGFDPDIDLSKVG 306
Query: 962 IANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075
IANQTTMLKGETE+IGKLVE+TMMRKYGVENVN+HF+S
Sbjct: 307 IANQTTMLKGETEEIGKLVERTMMRKYGVENVNNHFIS 344
>gi|164605002|dbj|BAF98297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Hevea brasiliensis]
Length = 462
Score = 357 bits (916), Expect = 9e-097
Identities = 203/345 (58%), Positives = 243/345 (70%), Gaps = 35/345 (10%)
Frame = +2
Query: 98 RTDVFSPHSLAGSVCFRSRNSLSVKCS--GDSSA----AVESDFDAKVFRKNLTRSKNYN 259
R+D+FS +LA R LSV+C+ GD S+ AVESDFDAKVFR NLTRSKNYN
Sbjct: 13 RSDLFSRENLAP---LNRRKFLSVRCAAGGDESSAGSVAVESDFDAKVFRHNLTRSKNYN 69
Query: 260 RRGFGP*GRDPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRGVRVLLGR*ASRADCL 439
RRGFG H+ + E + ++ ++ V + L + C
Sbjct: 70 RRGFG--------HKEETLELMNQEYTSDIIKTLKENGNQYKWGNVTIKLAE--AYGFCW 119
Query: 440 RGQKAISS*EDLDYQ-------------RDHSQSDRQ*EVGGDGGENIPIEEGRKQFEVV 580
++A+ + Q + + + R E+ +NIP+ EG+K FEVV
Sbjct: 120 GVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEM---NVQNIPVGEGKKHFEVV 176
Query: 581 DKGDVVILPAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYA 760
D GDVVILPAFGAAV+EML+LS++NVQIVDTTCPWVSKVWNTVEKHKKG+YTSIIHGKY+
Sbjct: 177 DSGDVVILPAFGAAVEEMLTLSNKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYS 236
Query: 761 HEETVATASFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPD 940
HEET+ATASFAGK++IVKNM+EA YVCDYILGG+LNGSSST+EAFLEKFK AVS GFDPD
Sbjct: 237 HEETIATASFAGKHIIVKNMEEAMYVCDYILGGQLNGSSSTKEAFLEKFKYAVSKGFDPD 296
Query: 941 RDLIKCGIANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075
DL K GIANQTTMLKGETE+IGKLVEKTMMRKYGVENVNDHF+S
Sbjct: 297 VDLDKVGIANQTTMLKGETEEIGKLVEKTMMRKYGVENVNDHFIS 341
>gi|195928050|gb|ACG55683.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Hevea brasiliensis]
Length = 462
Score = 356 bits (912), Expect = 3e-096
Identities = 201/345 (58%), Positives = 243/345 (70%), Gaps = 35/345 (10%)
Frame = +2
Query: 98 RTDVFSPHSLAGSVCFRSRNSLSVKCS--GDSSA----AVESDFDAKVFRKNLTRSKNYN 259
R+++FS +LA R LSV+C+ GD S+ AVESDFDAKVFR NLTRSKNYN
Sbjct: 13 RSELFSRENLAP---LNRRRFLSVRCAAGGDESSAGSVAVESDFDAKVFRHNLTRSKNYN 69
Query: 260 RRGFGP*GRDPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRGVRVLLGR*ASRADCL 439
RRGFG H+ + E + ++ ++ V + L + C
Sbjct: 70 RRGFG--------HKEETLELMNQEYTSDIIKTLKENGNQYTWGDVTIKLAE--AYGFCW 119
Query: 440 RGQKAISS*EDLDYQ-------------RDHSQSDRQ*EVGGDGGENIPIEEGRKQFEVV 580
++A+ + Q + + + R E+ +NIP+ EG+K FEVV
Sbjct: 120 GVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEM---NVQNIPVGEGKKHFEVV 176
Query: 581 DKGDVVILPAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYA 760
D GDVVILPAFGAAV+EML+LS++NVQIVDTTCPWVSKVWNTVEKHKKG+YTSIIHGKY+
Sbjct: 177 DSGDVVILPAFGAAVEEMLTLSNKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYS 236
Query: 761 HEETVATASFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPD 940
HEET+ATASFAGK++IVKNM+EA YVCDYILGG+LNGSSST+EAFLEKFK AVS GFDPD
Sbjct: 237 HEETIATASFAGKHIIVKNMEEAMYVCDYILGGQLNGSSSTKEAFLEKFKYAVSKGFDPD 296
Query: 941 RDLIKCGIANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075
DL K G+ANQTTMLKGETE+IGKLVEKTMMRKYGVENVNDHF+S
Sbjct: 297 VDLDKAGVANQTTMLKGETEEIGKLVEKTMMRKYGVENVNDHFIS 341
>gi|189017050|gb|ACD70402.1| putative chloroplast
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Populus
trichocarpa]
Length = 426
Score = 350 bits (897), Expect = 1e-094
Identities = 194/310 (62%), Positives = 222/310 (71%), Gaps = 26/310 (8%)
Frame = +2
Query: 185 SSAAVESDFDAKVFRKNLTRSKNYNRRGFGP*GRDPRAHEPRIHQ*CY*EAEGERVRVHL 364
SS ++ES+FDAKVFR NLTRSKNYNRRGFG H+ + E + ++
Sbjct: 9 SSVSLESEFDAKVFRHNLTRSKNYNRRGFG--------HKEETLELMNREYTSDIIKKLK 60
Query: 365 GKRDREARRGVRVLLGR*ASRADCLRGQKAISS*EDLDYQ-------------RDHSQSD 505
A V V L + C ++A+ + Q + + +
Sbjct: 61 ENGYEYAWGNVTVKLAE--AYGFCWGVERAVQIAYEARKQFPDDKIWITNEIIHNPTVNK 118
Query: 506 RQ*EVGGDGGENIPIEEGRKQFEVVDKGDVVILPAFGAAVDEMLSLSDRNVQIVDTTCPW 685
R E+ EN+P+EEG+KQFEVV+ GDVVILPAFGAAVDEML+LS +NVQIVDTTCPW
Sbjct: 119 RLEEM---EVENVPVEEGKKQFEVVNGGDVVILPAFGAAVDEMLTLSSKNVQIVDTTCPW 175
Query: 686 VSKVWNTVEKHKKGDYTSIIHGKYAHEETVATASFAGKYVIVKNMDEASYVCDYILGGEL 865
VSKVW TVEKHKKGDYTSIIHGKYAHEETVATASFAGKY+IVK+M EA YVCDYILGGEL
Sbjct: 176 VSKVWTTVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKDMKEAMYVCDYILGGEL 235
Query: 866 NGSSSTREAFLEKFKKAVSPGFDPDRDLIKCGIANQTTMLKGETEDIGKLVEKTMMRKYG 1045
NGSSSTRE FLEKFK AVS GFDPD DL+K GIANQTTMLKGETEDIGKLVE+ MMRKYG
Sbjct: 236 NGSSSTREEFLEKFKNAVSKGFDPDSDLVKLGIANQTTMLKGETEDIGKLVERIMMRKYG 295
Query: 1046 VENVNDHFVS 1075
VENVNDHF+S
Sbjct: 296 VENVNDHFIS 305
>gi|157042741|gb|ABV02022.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate
reductase [Nicotiana langsdorffii x Nicotiana sanderae]
Length = 461
Score = 342 bits (875), Expect = 5e-092
Identities = 193/337 (57%), Positives = 234/337 (69%), Gaps = 32/337 (9%)
Frame = +2
Query: 122 SLAGSVCFRSRNSLSVKCSG-----DSSAAVESDFDAKVFRKNLTRSKNYNRRGFGP*GR 286
SL + FR V+CS SSA +S+FDAKVFRKNLTRS NYNR+GFG
Sbjct: 17 SLPETRTFRLPKFSVVRCSAGEAAPSSSATADSEFDAKVFRKNLTRSANYNRKGFG---- 72
Query: 287 DPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRG-VRVLLGR*ASRADCLRGQKAISS 463
H+ + E + + L + E G V V L + C ++A+
Sbjct: 73 ----HKEATLELLSQEYQSSDIIKKLKENGYEYTWGNVTVKLAE--AYGFCWGVERAVQI 126
Query: 464 *EDLDYQ-------------RDHSQSDRQ*EVGGDGGENIPIEEGRKQFEVVDKGDVVIL 604
+ Q + + + R E+ +NIPIEEG+K F+VVDK DVV+L
Sbjct: 127 AYEARKQFPTERLWITNEIIHNPTVNKRLEEM---DVKNIPIEEGKKNFDVVDKDDVVVL 183
Query: 605 PAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHEETVATA 784
PAFGAAVDEML LSD+NVQIVDTTCPWV+KVWNTVEKHKKGDYTSIIHGKY+HEETVATA
Sbjct: 184 PAFGAAVDEMLVLSDKNVQIVDTTCPWVTKVWNTVEKHKKGDYTSIIHGKYSHEETVATA 243
Query: 785 SFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPDRDLIKCGI 964
SFAGKY+IVKNM EA+YVCDYILGG+L+GSSST+EAF++KFK AVS GFDPD DL+K GI
Sbjct: 244 SFAGKYIIVKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGI 303
Query: 965 ANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075
ANQTTMLKGETE+IGK VE+TMM++YGVEN+N+HF+S
Sbjct: 304 ANQTTMLKGETEEIGKSVERTMMQRYGVENINNHFIS 340
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 557,520,039,616
Number of Sequences: 7387702
Number of Extensions: 557520039616
Number of Successful Extensions: 325166908
Number of sequences better than 0.0: 0
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