Blast details for RU26145 (GenBank)


BLASTX 7.6.2

Query= RU26145 /QuerySize=1112
        (1111 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|157340866|emb|CAO47671.1| unnamed protein product [Vitis vini...    361   1e-097
gi|164605002|dbj|BAF98297.1| 4-hydroxy-3-methylbut-2-enyl diphos...    357   9e-097
gi|195928050|gb|ACG55683.1| 4-hydroxy-3-methylbut-2-enyl diphosp...    356   3e-096
gi|189017050|gb|ACD70402.1| putative chloroplast 4-hydroxy-3-met...    350   1e-094
gi|157042741|gb|ABV02022.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-d...    342   5e-092

>gi|157340866|emb|CAO47671.1| unnamed protein product [Vitis vinifera]

          Length = 465

 Score =  361 bits (924), Expect = 1e-097
 Identities = 203/338 (60%), Positives = 241/338 (71%), Gaps = 30/338 (8%)
 Frame = +2

Query:  116 PHSLAGSVCFRSRNSLSVKCSGD------SSAAVESDFDAKVFRKNLTRSKNYNRRGFGP 277
            P + AG   FR R  LSV+CSG+      SS AV+SDFDAKVFR NLTRSKNYNR+GFG 
Sbjct:   19 PEAFAGIGVFRRRKPLSVRCSGESESSSSSSVAVDSDFDAKVFRHNLTRSKNYNRKGFG- 77

Query:  278 *GRDPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRG-VRVLLGR*ASRADCLRGQKA 454
                   H+    +    E   + ++  L +   E + G V V L    +   C   ++A
Sbjct:   78 -------HKDETLELMNREYTSDIIKT-LKENGNEYKWGNVTVKLAE--AYGFCWGVERA 127

Query:  455 ISS*EDLDYQRD-----------HSQSDRQ*EVGGDGGENIPIEEGRKQFEVVDKGDVVI 601
            +    +   Q             H+ +  Q  +     ++IPI++G+KQFEVVDKGDVVI
Sbjct:  128 VQIAYEARKQFPEEKIWITNEIIHNPTVNQ-RLAEMEVKDIPIDDGQKQFEVVDKGDVVI 186

Query:  602 LPAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHEETVAT 781
            LPAFGAAVDEML+LS++NVQIVDTTCPWVSKVWN VEKHKKG+YTSIIHGKY+HEET+AT
Sbjct:  187 LPAFGAAVDEMLTLSNKNVQIVDTTCPWVSKVWNIVEKHKKGEYTSIIHGKYSHEETIAT 246

Query:  782 ASFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPDRDLIKCG 961
            ASFAGKY+IVKNM EA YVCDYILGGEL+GSSSTRE F EKFK A+S GFDPD DL K G
Sbjct:  247 ASFAGKYIIVKNMAEAMYVCDYILGGELDGSSSTREEFFEKFKFAISEGFDPDIDLSKVG 306

Query:  962 IANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075
            IANQTTMLKGETE+IGKLVE+TMMRKYGVENVN+HF+S
Sbjct:  307 IANQTTMLKGETEEIGKLVERTMMRKYGVENVNNHFIS 344

>gi|164605002|dbj|BAF98297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
        [Hevea brasiliensis]

          Length = 462

 Score =  357 bits (916), Expect = 9e-097
 Identities = 203/345 (58%), Positives = 243/345 (70%), Gaps = 35/345 (10%)
 Frame = +2

Query:   98 RTDVFSPHSLAGSVCFRSRNSLSVKCS--GDSSA----AVESDFDAKVFRKNLTRSKNYN 259
            R+D+FS  +LA       R  LSV+C+  GD S+    AVESDFDAKVFR NLTRSKNYN
Sbjct:   13 RSDLFSRENLAP---LNRRKFLSVRCAAGGDESSAGSVAVESDFDAKVFRHNLTRSKNYN 69

Query:  260 RRGFGP*GRDPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRGVRVLLGR*ASRADCL 439
            RRGFG        H+    +    E   + ++      ++     V + L    +   C 
Sbjct:   70 RRGFG--------HKEETLELMNQEYTSDIIKTLKENGNQYKWGNVTIKLAE--AYGFCW 119

Query:  440 RGQKAISS*EDLDYQ-------------RDHSQSDRQ*EVGGDGGENIPIEEGRKQFEVV 580
              ++A+    +   Q              + + + R  E+     +NIP+ EG+K FEVV
Sbjct:  120 GVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEM---NVQNIPVGEGKKHFEVV 176

Query:  581 DKGDVVILPAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYA 760
            D GDVVILPAFGAAV+EML+LS++NVQIVDTTCPWVSKVWNTVEKHKKG+YTSIIHGKY+
Sbjct:  177 DSGDVVILPAFGAAVEEMLTLSNKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYS 236

Query:  761 HEETVATASFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPD 940
            HEET+ATASFAGK++IVKNM+EA YVCDYILGG+LNGSSST+EAFLEKFK AVS GFDPD
Sbjct:  237 HEETIATASFAGKHIIVKNMEEAMYVCDYILGGQLNGSSSTKEAFLEKFKYAVSKGFDPD 296

Query:  941 RDLIKCGIANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075
             DL K GIANQTTMLKGETE+IGKLVEKTMMRKYGVENVNDHF+S
Sbjct:  297 VDLDKVGIANQTTMLKGETEEIGKLVEKTMMRKYGVENVNDHFIS 341

>gi|195928050|gb|ACG55683.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
        [Hevea brasiliensis]

          Length = 462

 Score =  356 bits (912), Expect = 3e-096
 Identities = 201/345 (58%), Positives = 243/345 (70%), Gaps = 35/345 (10%)
 Frame = +2

Query:   98 RTDVFSPHSLAGSVCFRSRNSLSVKCS--GDSSA----AVESDFDAKVFRKNLTRSKNYN 259
            R+++FS  +LA       R  LSV+C+  GD S+    AVESDFDAKVFR NLTRSKNYN
Sbjct:   13 RSELFSRENLAP---LNRRRFLSVRCAAGGDESSAGSVAVESDFDAKVFRHNLTRSKNYN 69

Query:  260 RRGFGP*GRDPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRGVRVLLGR*ASRADCL 439
            RRGFG        H+    +    E   + ++      ++     V + L    +   C 
Sbjct:   70 RRGFG--------HKEETLELMNQEYTSDIIKTLKENGNQYTWGDVTIKLAE--AYGFCW 119

Query:  440 RGQKAISS*EDLDYQ-------------RDHSQSDRQ*EVGGDGGENIPIEEGRKQFEVV 580
              ++A+    +   Q              + + + R  E+     +NIP+ EG+K FEVV
Sbjct:  120 GVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEM---NVQNIPVGEGKKHFEVV 176

Query:  581 DKGDVVILPAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYA 760
            D GDVVILPAFGAAV+EML+LS++NVQIVDTTCPWVSKVWNTVEKHKKG+YTSIIHGKY+
Sbjct:  177 DSGDVVILPAFGAAVEEMLTLSNKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYS 236

Query:  761 HEETVATASFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPD 940
            HEET+ATASFAGK++IVKNM+EA YVCDYILGG+LNGSSST+EAFLEKFK AVS GFDPD
Sbjct:  237 HEETIATASFAGKHIIVKNMEEAMYVCDYILGGQLNGSSSTKEAFLEKFKYAVSKGFDPD 296

Query:  941 RDLIKCGIANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075
             DL K G+ANQTTMLKGETE+IGKLVEKTMMRKYGVENVNDHF+S
Sbjct:  297 VDLDKAGVANQTTMLKGETEEIGKLVEKTMMRKYGVENVNDHFIS 341

>gi|189017050|gb|ACD70402.1| putative chloroplast
        4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Populus
        trichocarpa]

          Length = 426

 Score =  350 bits (897), Expect = 1e-094
 Identities = 194/310 (62%), Positives = 222/310 (71%), Gaps = 26/310 (8%)
 Frame = +2

Query:  185 SSAAVESDFDAKVFRKNLTRSKNYNRRGFGP*GRDPRAHEPRIHQ*CY*EAEGERVRVHL 364
            SS ++ES+FDAKVFR NLTRSKNYNRRGFG        H+    +    E   + ++   
Sbjct:    9 SSVSLESEFDAKVFRHNLTRSKNYNRRGFG--------HKEETLELMNREYTSDIIKKLK 60

Query:  365 GKRDREARRGVRVLLGR*ASRADCLRGQKAISS*EDLDYQ-------------RDHSQSD 505
                  A   V V L    +   C   ++A+    +   Q              + + + 
Sbjct:   61 ENGYEYAWGNVTVKLAE--AYGFCWGVERAVQIAYEARKQFPDDKIWITNEIIHNPTVNK 118

Query:  506 RQ*EVGGDGGENIPIEEGRKQFEVVDKGDVVILPAFGAAVDEMLSLSDRNVQIVDTTCPW 685
            R  E+     EN+P+EEG+KQFEVV+ GDVVILPAFGAAVDEML+LS +NVQIVDTTCPW
Sbjct:  119 RLEEM---EVENVPVEEGKKQFEVVNGGDVVILPAFGAAVDEMLTLSSKNVQIVDTTCPW 175

Query:  686 VSKVWNTVEKHKKGDYTSIIHGKYAHEETVATASFAGKYVIVKNMDEASYVCDYILGGEL 865
            VSKVW TVEKHKKGDYTSIIHGKYAHEETVATASFAGKY+IVK+M EA YVCDYILGGEL
Sbjct:  176 VSKVWTTVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKDMKEAMYVCDYILGGEL 235

Query:  866 NGSSSTREAFLEKFKKAVSPGFDPDRDLIKCGIANQTTMLKGETEDIGKLVEKTMMRKYG 1045
            NGSSSTRE FLEKFK AVS GFDPD DL+K GIANQTTMLKGETEDIGKLVE+ MMRKYG
Sbjct:  236 NGSSSTREEFLEKFKNAVSKGFDPDSDLVKLGIANQTTMLKGETEDIGKLVERIMMRKYG 295

Query: 1046 VENVNDHFVS 1075
            VENVNDHF+S
Sbjct:  296 VENVNDHFIS 305

>gi|157042741|gb|ABV02022.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate
        reductase [Nicotiana langsdorffii x Nicotiana sanderae]

          Length = 461

 Score =  342 bits (875), Expect = 5e-092
 Identities = 193/337 (57%), Positives = 234/337 (69%), Gaps = 32/337 (9%)
 Frame = +2

Query:  122 SLAGSVCFRSRNSLSVKCSG-----DSSAAVESDFDAKVFRKNLTRSKNYNRRGFGP*GR 286
            SL  +  FR      V+CS       SSA  +S+FDAKVFRKNLTRS NYNR+GFG    
Sbjct:   17 SLPETRTFRLPKFSVVRCSAGEAAPSSSATADSEFDAKVFRKNLTRSANYNRKGFG---- 72

Query:  287 DPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRG-VRVLLGR*ASRADCLRGQKAISS 463
                H+    +    E +   +   L +   E   G V V L    +   C   ++A+  
Sbjct:   73 ----HKEATLELLSQEYQSSDIIKKLKENGYEYTWGNVTVKLAE--AYGFCWGVERAVQI 126

Query:  464 *EDLDYQ-------------RDHSQSDRQ*EVGGDGGENIPIEEGRKQFEVVDKGDVVIL 604
              +   Q              + + + R  E+     +NIPIEEG+K F+VVDK DVV+L
Sbjct:  127 AYEARKQFPTERLWITNEIIHNPTVNKRLEEM---DVKNIPIEEGKKNFDVVDKDDVVVL 183

Query:  605 PAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHEETVATA 784
            PAFGAAVDEML LSD+NVQIVDTTCPWV+KVWNTVEKHKKGDYTSIIHGKY+HEETVATA
Sbjct:  184 PAFGAAVDEMLVLSDKNVQIVDTTCPWVTKVWNTVEKHKKGDYTSIIHGKYSHEETVATA 243

Query:  785 SFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPDRDLIKCGI 964
            SFAGKY+IVKNM EA+YVCDYILGG+L+GSSST+EAF++KFK AVS GFDPD DL+K GI
Sbjct:  244 SFAGKYIIVKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGI 303

Query:  965 ANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075
            ANQTTMLKGETE+IGK VE+TMM++YGVEN+N+HF+S
Sbjct:  304 ANQTTMLKGETEEIGKSVERTMMQRYGVENINNHFIS 340

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 557,520,039,616
Number of Sequences: 7387702
Number of Extensions: 557520039616
Number of Successful Extensions: 325166908
Number of sequences better than 0.0: 0