BLASTX 7.6.2 Query= RU26145 /QuerySize=1112 (1111 letters) Database: GenBank nr; 7,387,702 sequences; 2,551,671,255 total letters Score E Sequences producing significant alignments: (bits) Value gi|157340866|emb|CAO47671.1| unnamed protein product [Vitis vini... 361 1e-097 gi|164605002|dbj|BAF98297.1| 4-hydroxy-3-methylbut-2-enyl diphos... 357 9e-097 gi|195928050|gb|ACG55683.1| 4-hydroxy-3-methylbut-2-enyl diphosp... 356 3e-096 gi|189017050|gb|ACD70402.1| putative chloroplast 4-hydroxy-3-met... 350 1e-094 gi|157042741|gb|ABV02022.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-d... 342 5e-092 >gi|157340866|emb|CAO47671.1| unnamed protein product [Vitis vinifera] Length = 465 Score = 361 bits (924), Expect = 1e-097 Identities = 203/338 (60%), Positives = 241/338 (71%), Gaps = 30/338 (8%) Frame = +2 Query: 116 PHSLAGSVCFRSRNSLSVKCSGD------SSAAVESDFDAKVFRKNLTRSKNYNRRGFGP 277 P + AG FR R LSV+CSG+ SS AV+SDFDAKVFR NLTRSKNYNR+GFG Sbjct: 19 PEAFAGIGVFRRRKPLSVRCSGESESSSSSSVAVDSDFDAKVFRHNLTRSKNYNRKGFG- 77 Query: 278 *GRDPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRG-VRVLLGR*ASRADCLRGQKA 454 H+ + E + ++ L + E + G V V L + C ++A Sbjct: 78 -------HKDETLELMNREYTSDIIKT-LKENGNEYKWGNVTVKLAE--AYGFCWGVERA 127 Query: 455 ISS*EDLDYQRD-----------HSQSDRQ*EVGGDGGENIPIEEGRKQFEVVDKGDVVI 601 + + Q H+ + Q + ++IPI++G+KQFEVVDKGDVVI Sbjct: 128 VQIAYEARKQFPEEKIWITNEIIHNPTVNQ-RLAEMEVKDIPIDDGQKQFEVVDKGDVVI 186 Query: 602 LPAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHEETVAT 781 LPAFGAAVDEML+LS++NVQIVDTTCPWVSKVWN VEKHKKG+YTSIIHGKY+HEET+AT Sbjct: 187 LPAFGAAVDEMLTLSNKNVQIVDTTCPWVSKVWNIVEKHKKGEYTSIIHGKYSHEETIAT 246 Query: 782 ASFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPDRDLIKCG 961 ASFAGKY+IVKNM EA YVCDYILGGEL+GSSSTRE F EKFK A+S GFDPD DL K G Sbjct: 247 ASFAGKYIIVKNMAEAMYVCDYILGGELDGSSSTREEFFEKFKFAISEGFDPDIDLSKVG 306 Query: 962 IANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075 IANQTTMLKGETE+IGKLVE+TMMRKYGVENVN+HF+S Sbjct: 307 IANQTTMLKGETEEIGKLVERTMMRKYGVENVNNHFIS 344 >gi|164605002|dbj|BAF98297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hevea brasiliensis] Length = 462 Score = 357 bits (916), Expect = 9e-097 Identities = 203/345 (58%), Positives = 243/345 (70%), Gaps = 35/345 (10%) Frame = +2 Query: 98 RTDVFSPHSLAGSVCFRSRNSLSVKCS--GDSSA----AVESDFDAKVFRKNLTRSKNYN 259 R+D+FS +LA R LSV+C+ GD S+ AVESDFDAKVFR NLTRSKNYN Sbjct: 13 RSDLFSRENLAP---LNRRKFLSVRCAAGGDESSAGSVAVESDFDAKVFRHNLTRSKNYN 69 Query: 260 RRGFGP*GRDPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRGVRVLLGR*ASRADCL 439 RRGFG H+ + E + ++ ++ V + L + C Sbjct: 70 RRGFG--------HKEETLELMNQEYTSDIIKTLKENGNQYKWGNVTIKLAE--AYGFCW 119 Query: 440 RGQKAISS*EDLDYQ-------------RDHSQSDRQ*EVGGDGGENIPIEEGRKQFEVV 580 ++A+ + Q + + + R E+ +NIP+ EG+K FEVV Sbjct: 120 GVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEM---NVQNIPVGEGKKHFEVV 176 Query: 581 DKGDVVILPAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYA 760 D GDVVILPAFGAAV+EML+LS++NVQIVDTTCPWVSKVWNTVEKHKKG+YTSIIHGKY+ Sbjct: 177 DSGDVVILPAFGAAVEEMLTLSNKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYS 236 Query: 761 HEETVATASFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPD 940 HEET+ATASFAGK++IVKNM+EA YVCDYILGG+LNGSSST+EAFLEKFK AVS GFDPD Sbjct: 237 HEETIATASFAGKHIIVKNMEEAMYVCDYILGGQLNGSSSTKEAFLEKFKYAVSKGFDPD 296 Query: 941 RDLIKCGIANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075 DL K GIANQTTMLKGETE+IGKLVEKTMMRKYGVENVNDHF+S Sbjct: 297 VDLDKVGIANQTTMLKGETEEIGKLVEKTMMRKYGVENVNDHFIS 341 >gi|195928050|gb|ACG55683.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hevea brasiliensis] Length = 462 Score = 356 bits (912), Expect = 3e-096 Identities = 201/345 (58%), Positives = 243/345 (70%), Gaps = 35/345 (10%) Frame = +2 Query: 98 RTDVFSPHSLAGSVCFRSRNSLSVKCS--GDSSA----AVESDFDAKVFRKNLTRSKNYN 259 R+++FS +LA R LSV+C+ GD S+ AVESDFDAKVFR NLTRSKNYN Sbjct: 13 RSELFSRENLAP---LNRRRFLSVRCAAGGDESSAGSVAVESDFDAKVFRHNLTRSKNYN 69 Query: 260 RRGFGP*GRDPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRGVRVLLGR*ASRADCL 439 RRGFG H+ + E + ++ ++ V + L + C Sbjct: 70 RRGFG--------HKEETLELMNQEYTSDIIKTLKENGNQYTWGDVTIKLAE--AYGFCW 119 Query: 440 RGQKAISS*EDLDYQ-------------RDHSQSDRQ*EVGGDGGENIPIEEGRKQFEVV 580 ++A+ + Q + + + R E+ +NIP+ EG+K FEVV Sbjct: 120 GVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEM---NVQNIPVGEGKKHFEVV 176 Query: 581 DKGDVVILPAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYA 760 D GDVVILPAFGAAV+EML+LS++NVQIVDTTCPWVSKVWNTVEKHKKG+YTSIIHGKY+ Sbjct: 177 DSGDVVILPAFGAAVEEMLTLSNKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYS 236 Query: 761 HEETVATASFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPD 940 HEET+ATASFAGK++IVKNM+EA YVCDYILGG+LNGSSST+EAFLEKFK AVS GFDPD Sbjct: 237 HEETIATASFAGKHIIVKNMEEAMYVCDYILGGQLNGSSSTKEAFLEKFKYAVSKGFDPD 296 Query: 941 RDLIKCGIANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075 DL K G+ANQTTMLKGETE+IGKLVEKTMMRKYGVENVNDHF+S Sbjct: 297 VDLDKAGVANQTTMLKGETEEIGKLVEKTMMRKYGVENVNDHFIS 341 >gi|189017050|gb|ACD70402.1| putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Populus trichocarpa] Length = 426 Score = 350 bits (897), Expect = 1e-094 Identities = 194/310 (62%), Positives = 222/310 (71%), Gaps = 26/310 (8%) Frame = +2 Query: 185 SSAAVESDFDAKVFRKNLTRSKNYNRRGFGP*GRDPRAHEPRIHQ*CY*EAEGERVRVHL 364 SS ++ES+FDAKVFR NLTRSKNYNRRGFG H+ + E + ++ Sbjct: 9 SSVSLESEFDAKVFRHNLTRSKNYNRRGFG--------HKEETLELMNREYTSDIIKKLK 60 Query: 365 GKRDREARRGVRVLLGR*ASRADCLRGQKAISS*EDLDYQ-------------RDHSQSD 505 A V V L + C ++A+ + Q + + + Sbjct: 61 ENGYEYAWGNVTVKLAE--AYGFCWGVERAVQIAYEARKQFPDDKIWITNEIIHNPTVNK 118 Query: 506 RQ*EVGGDGGENIPIEEGRKQFEVVDKGDVVILPAFGAAVDEMLSLSDRNVQIVDTTCPW 685 R E+ EN+P+EEG+KQFEVV+ GDVVILPAFGAAVDEML+LS +NVQIVDTTCPW Sbjct: 119 RLEEM---EVENVPVEEGKKQFEVVNGGDVVILPAFGAAVDEMLTLSSKNVQIVDTTCPW 175 Query: 686 VSKVWNTVEKHKKGDYTSIIHGKYAHEETVATASFAGKYVIVKNMDEASYVCDYILGGEL 865 VSKVW TVEKHKKGDYTSIIHGKYAHEETVATASFAGKY+IVK+M EA YVCDYILGGEL Sbjct: 176 VSKVWTTVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKDMKEAMYVCDYILGGEL 235 Query: 866 NGSSSTREAFLEKFKKAVSPGFDPDRDLIKCGIANQTTMLKGETEDIGKLVEKTMMRKYG 1045 NGSSSTRE FLEKFK AVS GFDPD DL+K GIANQTTMLKGETEDIGKLVE+ MMRKYG Sbjct: 236 NGSSSTREEFLEKFKNAVSKGFDPDSDLVKLGIANQTTMLKGETEDIGKLVERIMMRKYG 295 Query: 1046 VENVNDHFVS 1075 VENVNDHF+S Sbjct: 296 VENVNDHFIS 305 >gi|157042741|gb|ABV02022.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate reductase [Nicotiana langsdorffii x Nicotiana sanderae] Length = 461 Score = 342 bits (875), Expect = 5e-092 Identities = 193/337 (57%), Positives = 234/337 (69%), Gaps = 32/337 (9%) Frame = +2 Query: 122 SLAGSVCFRSRNSLSVKCSG-----DSSAAVESDFDAKVFRKNLTRSKNYNRRGFGP*GR 286 SL + FR V+CS SSA +S+FDAKVFRKNLTRS NYNR+GFG Sbjct: 17 SLPETRTFRLPKFSVVRCSAGEAAPSSSATADSEFDAKVFRKNLTRSANYNRKGFG---- 72 Query: 287 DPRAHEPRIHQ*CY*EAEGERVRVHLGKRDREARRG-VRVLLGR*ASRADCLRGQKAISS 463 H+ + E + + L + E G V V L + C ++A+ Sbjct: 73 ----HKEATLELLSQEYQSSDIIKKLKENGYEYTWGNVTVKLAE--AYGFCWGVERAVQI 126 Query: 464 *EDLDYQ-------------RDHSQSDRQ*EVGGDGGENIPIEEGRKQFEVVDKGDVVIL 604 + Q + + + R E+ +NIPIEEG+K F+VVDK DVV+L Sbjct: 127 AYEARKQFPTERLWITNEIIHNPTVNKRLEEM---DVKNIPIEEGKKNFDVVDKDDVVVL 183 Query: 605 PAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHEETVATA 784 PAFGAAVDEML LSD+NVQIVDTTCPWV+KVWNTVEKHKKGDYTSIIHGKY+HEETVATA Sbjct: 184 PAFGAAVDEMLVLSDKNVQIVDTTCPWVTKVWNTVEKHKKGDYTSIIHGKYSHEETVATA 243 Query: 785 SFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPDRDLIKCGI 964 SFAGKY+IVKNM EA+YVCDYILGG+L+GSSST+EAF++KFK AVS GFDPD DL+K GI Sbjct: 244 SFAGKYIIVKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGI 303 Query: 965 ANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075 ANQTTMLKGETE+IGK VE+TMM++YGVEN+N+HF+S Sbjct: 304 ANQTTMLKGETEEIGKSVERTMMQRYGVENINNHFIS 340 Database: GenBank nr Posted date: Wed Dec 03 02:04:20 2008 Number of letters in database: 2,551,671,255 Number of sequences in database: 7,387,702 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 557,520,039,616 Number of Sequences: 7387702 Number of Extensions: 557520039616 Number of Successful Extensions: 325166908 Number of sequences better than 0.0: 0 |