BLASTX 7.6.2
Query= RU26303 /QuerySize=715
(714 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|81074849|gb|ABB55377.1| transcription factor NF-Y CCAAT-bindi... 233 2e-059
gi|42570373|ref|NP_850277.2| CCAAT-box binding transcription fac... 231 5e-059
gi|6729485|emb|CAB67641.1| transcription factor NF-Y, CCAAT-bind... 223 2e-056
gi|186511008|ref|NP_190902.2| transcription factor [Arabidopsis ... 223 2e-056
gi|90186489|gb|ABD91517.1| transcription factory NF-YB [Salvia m... 221 4e-056
>gi|81074849|gb|ABB55377.1| transcription factor NF-Y CCAAT-binding-like
protein-like [Solanum tuberosum]
Length = 165
Score = 233 bits (592), Expect = 2e-059
Identities = 120/165 (72%), Positives = 137/165 (83%), Gaps = 10/165 (6%)
Frame = +3
Query: 93 PTSP--AGGSHESGGEQSPQNGSSSNVREQDRYLPIANISRIMKKALPQNGKIAKDAKDT 266
P SP GGSHESGG+ SPQ SN+REQDRYLPIANI RIMKKALP NGKIAKD+KDT
Sbjct: 4 PASPGGGGGSHESGGDPSPQ----SNLREQDRYLPIANIGRIMKKALPANGKIAKDSKDT 59
Query: 267 VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLRIYLARYRELE 446
VQECVSEFISF+TSEASDKCQKEKRKTINGDDLL A+ATLGFEDYIEPL++YL RYRE+E
Sbjct: 60 VQECVSEFISFITSEASDKCQKEKRKTINGDDLLSALATLGFEDYIEPLKVYLTRYREME 119
Query: 447 GDAKGSARGGEGSAKGNPVGAMTGQNSQFVHQ----PPLNYVNSQ 569
GDAKGSAR G+ S + + VG+ G N+QF+++ L+Y NSQ
Sbjct: 120 GDAKGSARVGDASVRKDVVGSQLGSNTQFMYEGSFAQGLDYGNSQ 164
>gi|42570373|ref|NP_850277.2| CCAAT-box binding transcription factor, putative
[Arabidopsis thaliana]
Length = 173
Score = 231 bits (588), Expect = 5e-059
Identities = 116/165 (70%), Positives = 135/165 (81%), Gaps = 4/165 (2%)
Frame = +3
Query: 99 SPAG-GSHESGGEQSPQNGSSSNVREQDRYLPIANISRIMKKALPQNGKIAKDAKDTVQE 275
SP G GSHESGG+QSP+ S +VREQDR+LPIANISRIMK+ LP NGKIAKDAK+ VQE
Sbjct: 8 SPGGCGSHESGGDQSPR---SLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQE 64
Query: 276 CVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLRIYLARYRELEGDA 455
CVSEFISFVTSEASDKCQ+EKRKTINGDDLLWAMATLGFEDY+EPL++YL RYRE+EGD
Sbjct: 65 CVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDT 124
Query: 456 KGSARGGEGSAKGNPVGAMTGQNSQFVHQPPLNYVNSQEDYYVPL 590
KGSA+GG+ +AK + + GQ SQ HQ P +Q+ VP+
Sbjct: 125 KGSAKGGDPNAKKDGQSSQNGQFSQLAHQGPYGNSQAQQHMMVPM 169
>gi|6729485|emb|CAB67641.1| transcription factor NF-Y, CCAAT-binding-like
protein [Arabidopsis thaliana]
Length = 228
Score = 223 bits (566), Expect = 2e-056
Identities = 114/157 (72%), Positives = 129/157 (82%), Gaps = 6/157 (3%)
Frame = +3
Query: 108 GGSHESGGEQSPQNGSSSNVREQDRYLPIANISRIMKKALPQNGKIAKDAKDTVQECVSE 287
GGSHESGG+QSP+ S NVREQDR+LPIANISRIMK+ LP NGKIAKDAK+T+QECVSE
Sbjct: 11 GGSHESGGDQSPR---SLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSE 67
Query: 288 FISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLRIYLARYRELEGDAKGSA 467
FISFVTSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYI+PL++YL RYRE+EGD KGS
Sbjct: 68 FISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSG 127
Query: 468 RGGEGSAKGNPVGAMTGQNSQFVHQPPLN---YVNSQ 569
+GGE SAK + + Q SQ Q + Y NSQ
Sbjct: 128 KGGESSAKRDGQPSQVSQFSQVPQQGSFSQGPYGNSQ 164
>gi|186511008|ref|NP_190902.2| transcription factor [Arabidopsis thaliana]
Length = 176
Score = 223 bits (566), Expect = 2e-056
Identities = 114/157 (72%), Positives = 129/157 (82%), Gaps = 6/157 (3%)
Frame = +3
Query: 108 GGSHESGGEQSPQNGSSSNVREQDRYLPIANISRIMKKALPQNGKIAKDAKDTVQECVSE 287
GGSHESGG+QSP+ S NVREQDR+LPIANISRIMK+ LP NGKIAKDAK+T+QECVSE
Sbjct: 11 GGSHESGGDQSPR---SLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSE 67
Query: 288 FISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLRIYLARYRELEGDAKGSA 467
FISFVTSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYI+PL++YL RYRE+EGD KGS
Sbjct: 68 FISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSG 127
Query: 468 RGGEGSAKGNPVGAMTGQNSQFVHQPPLN---YVNSQ 569
+GGE SAK + + Q SQ Q + Y NSQ
Sbjct: 128 KGGESSAKRDGQPSQVSQFSQVPQQGSFSQGPYGNSQ 164
>gi|90186489|gb|ABD91517.1| transcription factory NF-YB [Salvia miltiorrhiza]
Length = 200
Score = 221 bits (563), Expect = 4e-056
Identities = 113/149 (75%), Positives = 126/149 (84%), Gaps = 7/149 (4%)
Frame = +3
Query: 99 SPAG-GSHES--GGEQSPQNGSSSNVREQDRYLPIANISRIMKKALPQNGKIAKDAKDTV 269
SP G GSH++ GG+ SPQ S+VREQDR+LPIANI RIMKK LPQNGKIAKDAKDTV
Sbjct: 4 SPGGHGSHDNGGGGDHSPQ----SSVREQDRFLPIANIGRIMKKGLPQNGKIAKDAKDTV 59
Query: 270 QECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLRIYLARYRELEG 449
QECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYI PL++YLARYRELEG
Sbjct: 60 QECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIAPLKVYLARYRELEG 119
Query: 450 DAKGSARGGEGSAKGNPVGAMTGQNSQFV 536
D KGSARG +G+ K + VG G ++ +
Sbjct: 120 DTKGSARGADGAPKRDTVGTQLGSDASLL 148
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 557,520,039,616
Number of Sequences: 7387702
Number of Extensions: 557520039616
Number of Successful Extensions: 325166908
Number of sequences better than 0.0: 0
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