BLASTX 7.6.2 Query= RU26529 /QuerySize=608 (607 letters) Database: GenBank nr; 7,387,702 sequences; 2,551,671,255 total letters Score E Sequences producing significant alignments: (bits) Value gi|161958656|dbj|BAF95167.1| similar to putative preRNA processi... 152 2e-035 gi|42564104|ref|NP_187892.2| nucleolar protein Nop56, putative [... 152 2e-035 gi|110741586|dbj|BAE98741.1| putative nucleolar protein [Arabido... 152 2e-035 gi|51102310|gb|AAT95868.1| putative preRNA processing ribonucleo... 151 4e-035 gi|15223458|ref|NP_176007.1| NOP56 (ARABIDOPSIS HOMOLOG OF NUCLE... 149 1e-034 >gi|161958656|dbj|BAF95167.1| similar to putative preRNA processing ribonucleoprotein [Ipomoea nil] Length = 194 Score = 152 bits (383), Expect = 2e-035 Identities = 72/77 (93%), Positives = 76/77 (98%) Frame = +2 Query: 2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181 ALKTKGNTPKYGLIFHSSFIGRASA+NKGRMARYLANKCSIASR+DCF DN+TT+FGEKL Sbjct: 16 ALKTKGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRLDCFLDNNTTSFGEKL 75 Query: 182 REQVEERLDFYDKGVAP 232 REQVEERLDFYDKGVAP Sbjct: 76 REQVEERLDFYDKGVAP 92 >gi|42564104|ref|NP_187892.2| nucleolar protein Nop56, putative [Arabidopsis thaliana] Length = 499 Score = 152 bits (382), Expect = 2e-035 Identities = 72/77 (93%), Positives = 77/77 (100%) Frame = +2 Query: 2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181 ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+AR+LANKCSIASRIDCF+DNSTTAFGEKL Sbjct: 341 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKL 400 Query: 182 REQVEERLDFYDKGVAP 232 REQVEERLDFYDKGVAP Sbjct: 401 REQVEERLDFYDKGVAP 417 >gi|110741586|dbj|BAE98741.1| putative nucleolar protein [Arabidopsis thaliana] Length = 465 Score = 152 bits (382), Expect = 2e-035 Identities = 72/77 (93%), Positives = 77/77 (100%) Frame = +2 Query: 2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181 ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+AR+LANKCSIASRIDCF+DNSTTAFGEKL Sbjct: 341 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKL 400 Query: 182 REQVEERLDFYDKGVAP 232 REQVEERLDFYDKGVAP Sbjct: 401 REQVEERLDFYDKGVAP 417 >gi|51102310|gb|AAT95868.1| putative preRNA processing ribonucleoprotein [Brassica juncea] Length = 138 Score = 151 bits (380), Expect = 4e-035 Identities = 72/77 (93%), Positives = 76/77 (98%) Frame = +2 Query: 2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181 ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+ARYLANKCSIASRIDCFAD +TTAFGEKL Sbjct: 26 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARYLANKCSIASRIDCFADGATTAFGEKL 85 Query: 182 REQVEERLDFYDKGVAP 232 REQVEERLDFYDKGVAP Sbjct: 86 REQVEERLDFYDKGVAP 102 >gi|15223458|ref|NP_176007.1| NOP56 (ARABIDOPSIS HOMOLOG OF NUCLEOLAR PROTEIN NOP56) [Arabidopsis thaliana] Length = 522 Score = 149 bits (376), Expect = 1e-034 Identities = 71/77 (92%), Positives = 76/77 (98%) Frame = +2 Query: 2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181 ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+ARYLANKCSIASRIDCFAD +TTAFGEKL Sbjct: 341 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARYLANKCSIASRIDCFADGATTAFGEKL 400 Query: 182 REQVEERLDFYDKGVAP 232 REQVEERL+FYDKGVAP Sbjct: 401 REQVEERLEFYDKGVAP 417 Database: GenBank nr Posted date: Wed Dec 03 02:04:20 2008 Number of letters in database: 2,551,671,255 Number of sequences in database: 7,387,702 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 564,142,023,160 Number of Sequences: 7387702 Number of Extensions: 564142023160 Number of Successful Extensions: 332491098 Number of sequences better than 0.0: 0 |