Blast details for RU26529 (GenBank)


BLASTX 7.6.2

Query= RU26529 /QuerySize=608
        (607 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|161958656|dbj|BAF95167.1| similar to putative preRNA processi...    152   2e-035
gi|42564104|ref|NP_187892.2| nucleolar protein Nop56, putative [...    152   2e-035
gi|110741586|dbj|BAE98741.1| putative nucleolar protein [Arabido...    152   2e-035
gi|51102310|gb|AAT95868.1| putative preRNA processing ribonucleo...    151   4e-035
gi|15223458|ref|NP_176007.1| NOP56 (ARABIDOPSIS HOMOLOG OF NUCLE...    149   1e-034

>gi|161958656|dbj|BAF95167.1| similar to putative preRNA processing
        ribonucleoprotein [Ipomoea nil]

          Length = 194

 Score =  152 bits (383), Expect = 2e-035
 Identities = 72/77 (93%), Positives = 76/77 (98%)
 Frame = +2

Query:   2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181
           ALKTKGNTPKYGLIFHSSFIGRASA+NKGRMARYLANKCSIASR+DCF DN+TT+FGEKL
Sbjct:  16 ALKTKGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRLDCFLDNNTTSFGEKL 75

Query: 182 REQVEERLDFYDKGVAP 232
           REQVEERLDFYDKGVAP
Sbjct:  76 REQVEERLDFYDKGVAP 92

>gi|42564104|ref|NP_187892.2| nucleolar protein Nop56, putative [Arabidopsis
        thaliana]

          Length = 499

 Score =  152 bits (382), Expect = 2e-035
 Identities = 72/77 (93%), Positives = 77/77 (100%)
 Frame = +2

Query:   2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181
           ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+AR+LANKCSIASRIDCF+DNSTTAFGEKL
Sbjct: 341 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKL 400

Query: 182 REQVEERLDFYDKGVAP 232
           REQVEERLDFYDKGVAP
Sbjct: 401 REQVEERLDFYDKGVAP 417

>gi|110741586|dbj|BAE98741.1| putative nucleolar protein [Arabidopsis thaliana]

          Length = 465

 Score =  152 bits (382), Expect = 2e-035
 Identities = 72/77 (93%), Positives = 77/77 (100%)
 Frame = +2

Query:   2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181
           ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+AR+LANKCSIASRIDCF+DNSTTAFGEKL
Sbjct: 341 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKL 400

Query: 182 REQVEERLDFYDKGVAP 232
           REQVEERLDFYDKGVAP
Sbjct: 401 REQVEERLDFYDKGVAP 417

>gi|51102310|gb|AAT95868.1| putative preRNA processing ribonucleoprotein
        [Brassica juncea]

          Length = 138

 Score =  151 bits (380), Expect = 4e-035
 Identities = 72/77 (93%), Positives = 76/77 (98%)
 Frame = +2

Query:   2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181
           ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+ARYLANKCSIASRIDCFAD +TTAFGEKL
Sbjct:  26 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARYLANKCSIASRIDCFADGATTAFGEKL 85

Query: 182 REQVEERLDFYDKGVAP 232
           REQVEERLDFYDKGVAP
Sbjct:  86 REQVEERLDFYDKGVAP 102

>gi|15223458|ref|NP_176007.1| NOP56 (ARABIDOPSIS HOMOLOG OF NUCLEOLAR PROTEIN
        NOP56) [Arabidopsis thaliana]

          Length = 522

 Score =  149 bits (376), Expect = 1e-034
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = +2

Query:   2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181
           ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+ARYLANKCSIASRIDCFAD +TTAFGEKL
Sbjct: 341 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARYLANKCSIASRIDCFADGATTAFGEKL 400

Query: 182 REQVEERLDFYDKGVAP 232
           REQVEERL+FYDKGVAP
Sbjct: 401 REQVEERLEFYDKGVAP 417

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 564,142,023,160
Number of Sequences: 7387702
Number of Extensions: 564142023160
Number of Successful Extensions: 332491098
Number of sequences better than 0.0: 0