BLASTX 7.6.2
Query= RU26529 /QuerySize=608
(607 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|161958656|dbj|BAF95167.1| similar to putative preRNA processi... 152 2e-035
gi|42564104|ref|NP_187892.2| nucleolar protein Nop56, putative [... 152 2e-035
gi|110741586|dbj|BAE98741.1| putative nucleolar protein [Arabido... 152 2e-035
gi|51102310|gb|AAT95868.1| putative preRNA processing ribonucleo... 151 4e-035
gi|15223458|ref|NP_176007.1| NOP56 (ARABIDOPSIS HOMOLOG OF NUCLE... 149 1e-034
>gi|161958656|dbj|BAF95167.1| similar to putative preRNA processing
ribonucleoprotein [Ipomoea nil]
Length = 194
Score = 152 bits (383), Expect = 2e-035
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +2
Query: 2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181
ALKTKGNTPKYGLIFHSSFIGRASA+NKGRMARYLANKCSIASR+DCF DN+TT+FGEKL
Sbjct: 16 ALKTKGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRLDCFLDNNTTSFGEKL 75
Query: 182 REQVEERLDFYDKGVAP 232
REQVEERLDFYDKGVAP
Sbjct: 76 REQVEERLDFYDKGVAP 92
>gi|42564104|ref|NP_187892.2| nucleolar protein Nop56, putative [Arabidopsis
thaliana]
Length = 499
Score = 152 bits (382), Expect = 2e-035
Identities = 72/77 (93%), Positives = 77/77 (100%)
Frame = +2
Query: 2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181
ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+AR+LANKCSIASRIDCF+DNSTTAFGEKL
Sbjct: 341 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKL 400
Query: 182 REQVEERLDFYDKGVAP 232
REQVEERLDFYDKGVAP
Sbjct: 401 REQVEERLDFYDKGVAP 417
>gi|110741586|dbj|BAE98741.1| putative nucleolar protein [Arabidopsis thaliana]
Length = 465
Score = 152 bits (382), Expect = 2e-035
Identities = 72/77 (93%), Positives = 77/77 (100%)
Frame = +2
Query: 2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181
ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+AR+LANKCSIASRIDCF+DNSTTAFGEKL
Sbjct: 341 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKL 400
Query: 182 REQVEERLDFYDKGVAP 232
REQVEERLDFYDKGVAP
Sbjct: 401 REQVEERLDFYDKGVAP 417
>gi|51102310|gb|AAT95868.1| putative preRNA processing ribonucleoprotein
[Brassica juncea]
Length = 138
Score = 151 bits (380), Expect = 4e-035
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +2
Query: 2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181
ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+ARYLANKCSIASRIDCFAD +TTAFGEKL
Sbjct: 26 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARYLANKCSIASRIDCFADGATTAFGEKL 85
Query: 182 REQVEERLDFYDKGVAP 232
REQVEERLDFYDKGVAP
Sbjct: 86 REQVEERLDFYDKGVAP 102
>gi|15223458|ref|NP_176007.1| NOP56 (ARABIDOPSIS HOMOLOG OF NUCLEOLAR PROTEIN
NOP56) [Arabidopsis thaliana]
Length = 522
Score = 149 bits (376), Expect = 1e-034
Identities = 71/77 (92%), Positives = 76/77 (98%)
Frame = +2
Query: 2 ALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFADNSTTAFGEKL 181
ALKT+GNTPKYGLIFHSSFIGRASA+NKGR+ARYLANKCSIASRIDCFAD +TTAFGEKL
Sbjct: 341 ALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARYLANKCSIASRIDCFADGATTAFGEKL 400
Query: 182 REQVEERLDFYDKGVAP 232
REQVEERL+FYDKGVAP
Sbjct: 401 REQVEERLEFYDKGVAP 417
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 564,142,023,160
Number of Sequences: 7387702
Number of Extensions: 564142023160
Number of Successful Extensions: 332491098
Number of sequences better than 0.0: 0
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