BLASTX 7.6.2
Query= RU26578 /QuerySize=972
(971 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|113734309|dbj|BAF30480.1| cytochrome c oxidase subunit Vb [Pi... 218 5e-055
gi|113734315|dbj|BAF30483.1| cytochrome c oxidase subunit Vb [Pi... 217 1e-054
gi|118488066|gb|ABK95853.1| unknown [Populus trichocarpa] 215 4e-054
gi|82623399|gb|ABB87114.1| cytochrome c oxidase family protein-l... 213 2e-053
gi|106879617|emb|CAJ38392.1| cytochrome c oxidase subunit 5b [Pl... 202 5e-050
>gi|113734309|dbj|BAF30480.1| cytochrome c oxidase subunit Vb [Pisum sativum]
Length = 155
Score = 218 bits (555), Expect = 5e-055
Identities = 106/146 (72%), Positives = 118/146 (80%), Gaps = 9/146 (6%)
Frame = +2
Query: 221 RSAAAASSPARFFIPKP------LPRYFSTTPSVDTSVKKKVEEIMPIATGHELEELAAE 382
++ ++SSP R P P L +FST T VKKKVE+I+PIATGHE EEL A+
Sbjct: 11 KTLTSSSSPLR--SPSPAVAVSLLSCHFSTQSDDSTVVKKKVEDIVPIATGHEREELQAQ 68
Query: 383 VQGKDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHEC 562
++G+DILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEK KPHEC
Sbjct: 69 IEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHEC 128
Query: 563 PVCSQYFVLEVVGPGGSP-DHSDDHH 637
PVC+QYFVLEVVGPGG P H DDHH
Sbjct: 129 PVCAQYFVLEVVGPGGPPYGHGDDHH 154
>gi|113734315|dbj|BAF30483.1| cytochrome c oxidase subunit Vb [Pisum sativum]
Length = 155
Score = 217 bits (552), Expect = 1e-054
Identities = 106/146 (72%), Positives = 117/146 (80%), Gaps = 9/146 (6%)
Frame = +2
Query: 221 RSAAAASSPARFFIPKP------LPRYFSTTPSVDTSVKKKVEEIMPIATGHELEELAAE 382
++ ++SSP R P P L FST T VKKKVE+I+PIATGHE EEL A+
Sbjct: 11 KTLTSSSSPLR--SPSPAVAVSLLSCLFSTQSDDSTVVKKKVEDIVPIATGHEREELQAQ 68
Query: 383 VQGKDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHEC 562
++G+DILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEK KPHEC
Sbjct: 69 IEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHEC 128
Query: 563 PVCSQYFVLEVVGPGGSP-DHSDDHH 637
PVC+QYFVLEVVGPGG P H DDHH
Sbjct: 129 PVCAQYFVLEVVGPGGPPYGHGDDHH 154
>gi|118488066|gb|ABK95853.1| unknown [Populus trichocarpa]
Length = 168
Score = 215 bits (547), Expect = 4e-054
Identities = 109/170 (64%), Positives = 127/170 (74%), Gaps = 14/170 (8%)
Frame = +2
Query: 149 LSSAQLRTLTLAASSSSAAAAAPCRSAAAASSPARFFIPKP----LPRYFSTTPSVDTSV 316
L+S+ LRTL + S++SA RS + P P RYFS SVD +V
Sbjct: 5 LASSHLRTLVTSTSTTSA------RSTQSLLLNRSIINPSPSTSLFNRYFS-ADSVDGAV 57
Query: 317 KKKVEEIMPIATGHELEELAAEVQGKDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPG 496
KK+VE++MPIATGHE EEL AE++GK +L+ID+P+GPFGTKE PAV+KSYYDKRIVGCPG
Sbjct: 58 KKRVEDVMPIATGHEREELEAELEGKKLLDIDYPDGPFGTKEKPAVIKSYYDKRIVGCPG 117
Query: 497 GEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGSPD---HSDDHH 637
GEGEDEHDVVWFWLEKGKPHECPVC+Q FVLEVVGPGG PD DDHH
Sbjct: 118 GEGEDEHDVVWFWLEKGKPHECPVCTQNFVLEVVGPGGPPDGHGDDDDHH 167
>gi|82623399|gb|ABB87114.1| cytochrome c oxidase family protein-like [Solanum
tuberosum]
Length = 167
Score = 213 bits (542), Expect = 2e-053
Identities = 105/165 (63%), Positives = 127/165 (76%), Gaps = 7/165 (4%)
Frame = +2
Query: 155 SAQLRTLTLAASSSSAAAAAPCRSAAAASSPARFFIPKP-LPRYFSTTPSVDTSVKKKVE 331
S+Q+RTL+ S++ + + + +SSPA F P + R+FST +V KK+E
Sbjct: 6 SSQVRTLSPLRSTAKSNRLSAAAVTSLSSSPATFRPTVPFISRHFST---ASANVVKKIE 62
Query: 332 EIMPIATGHELEELAAEVQGKDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGED 511
++MPIATGHE EEL AE+QGKD+L I+ PEGPFGTKEAPAVV+SYYDKRIVGCPG EGED
Sbjct: 63 DVMPIATGHEREELEAEIQGKDLLAINFPEGPFGTKEAPAVVESYYDKRIVGCPGDEGED 122
Query: 512 EHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGSP---DHSDDHH 637
EHDVVWFWLEKGKPHECPVC+Q+FVL+VVGPGG P D DDHH
Sbjct: 123 EHDVVWFWLEKGKPHECPVCAQHFVLKVVGPGGPPDGHDDDDDHH 167
>gi|106879617|emb|CAJ38392.1| cytochrome c oxidase subunit 5b [Plantago major]
Length = 162
Score = 202 bits (512), Expect = 5e-050
Identities = 93/126 (73%), Positives = 106/126 (84%), Gaps = 1/126 (0%)
Frame = +2
Query: 263 PKPLPRYFSTTPSVDTSVKKKVEEIMPIATGHELEELAAEVQGKDILEIDHPEGPFGTKE 442
P+ L F+ + +V K+ E+++PI TGHE EEL AE+QGKDILEI++PEGPFGTKE
Sbjct: 35 PESLRSSFALFNTESGNVAKRPEDVIPIVTGHEREELQAELQGKDILEINYPEGPFGTKE 94
Query: 443 APAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGSPD- 619
PAVVKSYYDKRIVGCPG +GEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGSPD
Sbjct: 95 EPAVVKSYYDKRIVGCPGADGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGSPDG 154
Query: 620 HSDDHH 637
H +D H
Sbjct: 155 HDEDSH 160
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 564,142,023,160
Number of Sequences: 7387702
Number of Extensions: 564142023160
Number of Successful Extensions: 332491098
Number of sequences better than 0.0: 0
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