BLASTX 7.6.2
Query= RU26730 /QuerySize=839
(838 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|148372347|gb|ABQ63097.1| photosystem I subunit PsaD [Glycine ... 330 7e-089
gi|21289|emb|CAA32182.1| unnamed protein product [Spinacia olera... 318 4e-085
gi|19855891|sp|P12353|PSAD_SPIOL Photosystem I reaction center s... 317 8e-085
gi|21293|emb|CAA68728.1| unnamed protein product [Spinacia olera... 317 1e-084
gi|118489639|gb|ABK96621.1| unknown [Populus trichocarpa x Popul... 310 1e-082
>gi|148372347|gb|ABQ63097.1| photosystem I subunit PsaD [Glycine max]
Length = 210
Score = 330 bits (846), Expect = 7e-089
Identities = 168/214 (78%), Positives = 178/214 (83%), Gaps = 13/214 (6%)
Frame = +3
Query: 66 MAMATQATLFTP---------TASAPWKQSVTSTFMAPKSLTLSTSAPRPMRIAAAEEKT 218
MAMATQA+L TP AS PWKQ+ + +F +PK L S R +R AAA+E T
Sbjct: 1 MAMATQASLLTPPLSGLKASDRASVPWKQNSSLSFSSPKPLKFS----RTIRAAAADETT 56
Query: 219 VAPTKEAEAPVGFTPPELDPTTPSPIFGGSTGGLLRKAQEEEFYVITWESPKEQIFEMPT 398
AP K APVGFTPPELDP TPSPIFGGSTGGLLRKAQ EEFYVITW+SPKEQIFEMPT
Sbjct: 57 EAPAKVEAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPT 116
Query: 399 GGVAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEK 578
GG AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEK
Sbjct: 117 GGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEK 176
Query: 579 VNPGRQGVGLNFRSIGKNVNPIEVKFTGKQVYDI 680
VN GRQGVG NFRSIGKNV+PIEVKFTGKQ YD+
Sbjct: 177 VNAGRQGVGQNFRSIGKNVSPIEVKFTGKQPYDL 210
>gi|21289|emb|CAA32182.1| unnamed protein product [Spinacia oleracea]
Length = 212
Score = 318 bits (814), Expect = 4e-085
Identities = 164/212 (77%), Positives = 177/212 (83%), Gaps = 7/212 (3%)
Frame = +3
Query: 66 MAMATQATLFTP---TASAPWKQSVTSTFMAPKSLTL-STSAPRPMRI---AAAEEKTVA 224
MAMATQATLF+P +++ P +T++F P +L+ S A R I AAAE K
Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSALSFASKPASRHHSIRAAAAAEGKAAT 60
Query: 225 PTKEAEAPVGFTPPELDPTTPSPIFGGSTGGLLRKAQEEEFYVITWESPKEQIFEMPTGG 404
PT+ EAP GFTPPELDP TPSPIF GSTGGLLRKAQ EEFYVITWESPKEQIFEMPTGG
Sbjct: 61 PTETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 120
Query: 405 VAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 584
AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVN
Sbjct: 121 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVN 180
Query: 585 PGRQGVGLNFRSIGKNVNPIEVKFTGKQVYDI 680
PGRQGVGLN RSIGKNV+PIEVKFTGKQ YD+
Sbjct: 181 PGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
>gi|19855891|sp|P12353|PSAD_SPIOL Photosystem I reaction center subunit II,
chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D)
Length = 212
Score = 317 bits (811), Expect = 8e-085
Identities = 164/212 (77%), Positives = 177/212 (83%), Gaps = 7/212 (3%)
Frame = +3
Query: 66 MAMATQATLFTP---TASAPWKQSVTSTFMAPKSLTL-STSAPRPMRI---AAAEEKTVA 224
MAMATQATLF+P +++ P +T++F P ++T S A R I AAAE K A
Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFASKPASRHHSIRAAAAAEGKAAA 60
Query: 225 PTKEAEAPVGFTPPELDPTTPSPIFGGSTGGLLRKAQEEEFYVITWESPKEQIFEMPTGG 404
T+ EAP GFTPPELDP TPSPIF GSTGGLLRKAQ EEFYVITWESPKEQIFEMPTGG
Sbjct: 61 ATETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 120
Query: 405 VAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 584
AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVN
Sbjct: 121 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVN 180
Query: 585 PGRQGVGLNFRSIGKNVNPIEVKFTGKQVYDI 680
PGRQGVGLN RSIGKNV+PIEVKFTGKQ YD+
Sbjct: 181 PGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
>gi|21293|emb|CAA68728.1| unnamed protein product [Spinacia oleracea]
Length = 212
Score = 317 bits (810), Expect = 1e-084
Identities = 164/212 (77%), Positives = 177/212 (83%), Gaps = 7/212 (3%)
Frame = +3
Query: 66 MAMATQATLFTP---TASAPWKQSVTSTFMAPKSLTL-STSAPRPMRI---AAAEEKTVA 224
MAMATQATLF+P +++ P +T++F P ++T S A R I AAAE K A
Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFASKPASRHHSIRAAAAAEGKRAA 60
Query: 225 PTKEAEAPVGFTPPELDPTTPSPIFGGSTGGLLRKAQEEEFYVITWESPKEQIFEMPTGG 404
T+ EAP GFTPPELDP TPSPIF GSTGGLLRKAQ EEFYVITWESPKEQIFEMPTGG
Sbjct: 61 ATETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 120
Query: 405 VAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 584
AIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVN
Sbjct: 121 AAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVN 180
Query: 585 PGRQGVGLNFRSIGKNVNPIEVKFTGKQVYDI 680
PGRQGVGLN RSIGKNV+PIEVKFTGKQ YD+
Sbjct: 181 PGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
>gi|118489639|gb|ABK96621.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 201
Score = 310 bits (793), Expect = 1e-082
Identities = 159/203 (78%), Positives = 170/203 (83%), Gaps = 8/203 (3%)
Frame = +3
Query: 81 QATLFTPTASAPWKQS--VTSTFMAPKSLTLSTSAP-RPMRIAAAEEKTVAPTKEAEAPV 251
QA+LFTP + K S + + L +S P R M++AAAEE V EAPV
Sbjct: 4 QASLFTPPTLSTLKSSNQAIAPWKQSSFLPISNVKPQRTMKVAAAEETAV-----KEAPV 58
Query: 252 GFTPPELDPTTPSPIFGGSTGGLLRKAQEEEFYVITWESPKEQIFEMPTGGVAIMREGPN 431
GFTPPELDP+TPSPIFGGSTGGLLRKAQ EEFYVITW+SPKEQIFEMPTGG AIMREGPN
Sbjct: 59 GFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQIFEMPTGGAAIMREGPN 118
Query: 432 LLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGLN 611
LLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG N
Sbjct: 119 LLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQN 178
Query: 612 FRSIGKNVNPIEVKFTGKQVYDI 680
FRSIGKNV+PIEVKFTGKQVYD+
Sbjct: 179 FRSIGKNVSPIEVKFTGKQVYDL 201
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 571,315,562,616
Number of Sequences: 7387702
Number of Extensions: 571315562616
Number of Successful Extensions: 339919939
Number of sequences better than 0.0: 0
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