BLASTX 7.6.2
Query= RU26741 /QuerySize=858
(857 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis ... 235 3e-060
gi|123379|sp|P26585.1|HMGL_SOYBN HMG1/2-like protein (Protein SB11) 202 3e-050
gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa] 199 3e-049
gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum ... 194 9e-048
gi|194466165|gb|ACF74313.1| high mobility group protein 2 [Arach... 193 2e-047
>gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 235 bits (599), Expect = 3e-060
Identities = 116/146 (79%), Positives = 130/146 (89%), Gaps = 2/146 (1%)
Frame = +2
Query: 98 KGGKSRAAAPKRSDTKLKTKSAGASKPAKKAGKDPNKPKRPASAFFVFMEEFREKYKKEH 277
KGGKS+ APK++DTKLK+KSAGASK + KA KDPNKPKRPASAFFVFMEEFR++YKKEH
Sbjct: 2 KGGKSK-GAPKKTDTKLKSKSAGASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKEH 60
Query: 278 PNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDNGVEEE 457
PNNKSVAAVGKAGG+KWKS+SDAEKAPY KAEKRK EYNK+M YNK+ AEG NG EEE
Sbjct: 61 PNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAEKRKTEYNKSMQAYNKRIAEGGNGAEEE 120
Query: 458 ESDKSKSEVNDED-DDESGGEDEDDD 532
ESDKSKSEVND+D DD+ GEDEDD+
Sbjct: 121 ESDKSKSEVNDDDEDDDESGEDEDDE 146
>gi|123379|sp|P26585.1|HMGL_SOYBN HMG1/2-like protein (Protein SB11)
Length = 152
Score = 202 bits (513), Expect = 3e-050
Identities = 104/153 (67%), Positives = 119/153 (77%), Gaps = 8/153 (5%)
Frame = +2
Query: 95 MKGGKSRAAAPKRSDTKLKTKSAGASKPAK------KAGKDPNKPKRPASAFFVFMEEFR 256
MKGGKS+ + KR+D KL GA+ A+ KA KDPNKPKRP SAFFVFMEEFR
Sbjct: 1 MKGGKSKTES-KRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFR 59
Query: 257 EKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 436
+ + KEHP NK+V+AVGKA G KWK++SDAEKAPY AK+EKRKVEY KNM YNKKQAEG
Sbjct: 60 KVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEG 119
Query: 437 DNGVEEEESDKSKSEVNDEDDDESG-GEDEDDD 532
G +EEES+KS SEVNDEDDDE G GE+EDDD
Sbjct: 120 PTGGDEEESEKSVSEVNDEDDDEEGSGEEEDDD 152
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 199 bits (505), Expect = 3e-049
Identities = 107/152 (70%), Positives = 121/152 (79%), Gaps = 7/152 (4%)
Frame = +2
Query: 95 MKGGKSRA--AAPKRSDTKLKTK--SAGASKPAKKAGKDPNKPKRPASAFFVFMEEFREK 262
MKGG+S++ + K S K TK +A A+K + KA KDPNKPKRPASAFFVFMEEFRE+
Sbjct: 1 MKGGRSKSDTKSAKLSVNKKPTKGGAAAAAKKSGKAAKDPNKPKRPASAFFVFMEEFREQ 60
Query: 263 YKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDN 442
YKKEHP NKSVAAVGKAGG+KWKSLS AEKAPY AKA+KRKVEY K M YNK+QAEG
Sbjct: 61 YKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKADKRKVEYEKKMKAYNKEQAEGPK 120
Query: 443 GVEEEESDKSKSEVNDED-DDESGGEDEDDDE 535
EEEES+KS SEVNDED DDE G +EDDD+
Sbjct: 121 --EEEESEKSVSEVNDEDEDDEEGSAEEDDDD 150
>gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 194 bits (492), Expect = 9e-048
Identities = 97/138 (70%), Positives = 110/138 (79%), Gaps = 3/138 (2%)
Frame = +2
Query: 116 AAAPKRSDTKLKT-KSAGASKPAKKAGKDPNKPKRPASAFFVFMEEFREKYKKEHPNNKS 292
A + ++DTKL K A SK AK A KDPNKPKRP SAFFVFMEEFR+ YK++HPNNKS
Sbjct: 4 AKSKAKADTKLGVRKKATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKS 63
Query: 293 VAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDNGVEEEESDKS 472
VA VGKAGG+KWK LSD EKAPYQAKAEKRK EY KNMD YNKK A GD ++EESDKS
Sbjct: 64 VAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLAAGD--ADDEESDKS 121
Query: 473 KSEVNDEDDDESGGEDED 526
KSEV+D+D+D+ G E ED
Sbjct: 122 KSEVHDDDEDDDGSEQED 139
>gi|194466165|gb|ACF74313.1| high mobility group protein 2 [Arachis hypogaea]
Length = 153
Score = 193 bits (489), Expect = 2e-047
Identities = 100/154 (64%), Positives = 115/154 (74%), Gaps = 8/154 (5%)
Frame = +2
Query: 95 MKGGKSRAAAPKRSDTKLKTKSAG--ASKPAKKAG-----KDPNKPKRPASAFFVFMEEF 253
MKG KS+A + KR D KL G A+K +K G KDPNK KRP SAFFVFMEEF
Sbjct: 1 MKGAKSKAES-KRGDAKLAVNKKGTPATKGGRKTGKGKAAKDPNKLKRPPSAFFVFMEEF 59
Query: 254 REKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAE 433
R+++ K+HP NK+V+AVGKA G KWK +SDAEKAPY AK+EKRK +Y KNM YNKKQAE
Sbjct: 60 RKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVAKSEKRKQDYEKNMRAYNKKQAE 119
Query: 434 GDNGVEEEESDKSKSEVNDEDDDESGGEDEDDDE 535
G G +EEESDKS SEVNDEDDDE G +EDDDE
Sbjct: 120 GPTGGDEEESDKSISEVNDEDDDEDGSGEEDDDE 153
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 571,315,562,616
Number of Sequences: 7387702
Number of Extensions: 571315562616
Number of Successful Extensions: 339919939
Number of sequences better than 0.0: 0
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