BLASTX 7.6.2
Query= RU26786 /QuerySize=777
(776 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118481582|gb|ABK92733.1| unknown [Populus trichocarpa] 290 7e-077
gi|118487980|gb|ABK95811.1| unknown [Populus trichocarpa] 286 2e-075
gi|157360775|emb|CAO70376.1| unnamed protein product [Vitis vini... 278 5e-073
gi|118481513|gb|ABK92699.1| unknown [Populus trichocarpa] 278 5e-073
gi|192913038|gb|ACF06627.1| 60S ribosomal protein L24 [Elaeis gu... 275 2e-072
>gi|118481582|gb|ABK92733.1| unknown [Populus trichocarpa]
Length = 163
Score = 290 bits (742), Expect = 7e-077
Identities = 142/163 (87%), Positives = 153/163 (93%)
Frame = +1
Query: 100 MVLKTELCRFSGAKIYPGSGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKITWTAMFRKL 279
MVLKTELCRFSGAKIYPG GIRFIRSDSQVFLF NSKCKRYFHNRLKPSK+TWTAM+RK
Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
Query: 280 HKKDSAQESVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 459
HKKD A E++KK+RRATKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALREIKERIK
Sbjct: 61 HKKDIAAETIKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIK 120
Query: 460 KTKDEKKAKKAEITAKSSKPTKGNLSKAAAPKGPKLGGGGGKR 588
KTKDEK+AKKAE+TAK K +KG++ K AAPKGPKLGGGGGKR
Sbjct: 121 KTKDEKRAKKAEVTAKVQKSSKGSVPKGAAPKGPKLGGGGGKR 163
>gi|118487980|gb|ABK95811.1| unknown [Populus trichocarpa]
Length = 163
Score = 286 bits (730), Expect = 2e-075
Identities = 140/163 (85%), Positives = 151/163 (92%)
Frame = +1
Query: 100 MVLKTELCRFSGAKIYPGSGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKITWTAMFRKL 279
MVLKTELCRFSGAKIYPG GIRFIRSDSQVFLF NSKCKRYFHN+LKPSK+TWTAM+RK
Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFANSKCKRYFHNKLKPSKLTWTAMYRKQ 60
Query: 280 HKKDSAQESVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 459
HKKD A E+VKK+RR TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKERIK
Sbjct: 61 HKKDIAAETVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIK 120
Query: 460 KTKDEKKAKKAEITAKSSKPTKGNLSKAAAPKGPKLGGGGGKR 588
KTKDEKKAKKAE+ +K+ K +KG+L K AAPKGPKLGGGGGKR
Sbjct: 121 KTKDEKKAKKAEVMSKAQKSSKGSLPKGAAPKGPKLGGGGGKR 163
>gi|157360775|emb|CAO70376.1| unnamed protein product [Vitis vinifera]
Length = 163
Score = 278 bits (709), Expect = 5e-073
Identities = 137/163 (84%), Positives = 145/163 (88%)
Frame = +1
Query: 100 MVLKTELCRFSGAKIYPGSGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKITWTAMFRKL 279
M +TELCRFSGAKIYPG GIRF+RSDSQVFLF NSKCKRYFHNRLKPSK+TWTAM+RK
Sbjct: 1 MDFRTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
Query: 280 HKKDSAQESVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 459
HKKD A E+VKKKRR KKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK
Sbjct: 61 HKKDIAAEAVKKKRRTAKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 120
Query: 460 KTKDEKKAKKAEITAKSSKPTKGNLSKAAAPKGPKLGGGGGKR 588
KTKDEKKAKKAE+ AK+ K + K AAPKGPKLGGGGGKR
Sbjct: 121 KTKDEKKAKKAEVMAKTQKTQSKGVPKGAAPKGPKLGGGGGKR 163
>gi|118481513|gb|ABK92699.1| unknown [Populus trichocarpa]
Length = 163
Score = 278 bits (709), Expect = 5e-073
Identities = 140/163 (85%), Positives = 144/163 (88%)
Frame = +1
Query: 100 MVLKTELCRFSGAKIYPGSGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKITWTAMFRKL 279
MVLKTELCRFSGAKIYPG GIRFIRSDSQVFLF NSKCKRYFHNRLKPSK+TWTAM+RK
Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
Query: 280 HKKDSAQESVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 459
HKKD A E+VKKKRR TKKPYSRSIVGATLEVIQKRR EKPEVRDAAREAALREIKERIK
Sbjct: 61 HKKDIAAEAVKKKRRTTKKPYSRSIVGATLEVIQKRRAEKPEVRDAAREAALREIKERIK 120
Query: 460 KTKDEKKAKKAEITAKSSKPTKGNLSKAAAPKGPKLGGGGGKR 588
KTKDEKKAKKAE AK+ K K A PKGPKLGGGGGKR
Sbjct: 121 KTKDEKKAKKAESMAKTQKTQTKGGPKGAGPKGPKLGGGGGKR 163
>gi|192913038|gb|ACF06627.1| 60S ribosomal protein L24 [Elaeis guineensis]
Length = 163
Score = 275 bits (703), Expect = 2e-072
Identities = 137/163 (84%), Positives = 145/163 (88%)
Frame = +1
Query: 100 MVLKTELCRFSGAKIYPGSGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKITWTAMFRKL 279
MVLKTELCRFSGAKIYPG GIRF+RSDSQVFLF NSKCKRYFHNRLKPSK+TWTAM+RK
Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
Query: 280 HKKDSAQESVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 459
HKKD E+VKK+RR TKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK
Sbjct: 61 HKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 120
Query: 460 KTKDEKKAKKAEITAKSSKPTKGNLSKAAAPKGPKLGGGGGKR 588
KTKDEKKAKKAE AK+ K ++ K A KGPKLGGGGGKR
Sbjct: 121 KTKDEKKAKKAETLAKTQKTQTKSMPKGPASKGPKLGGGGGKR 163
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 571,315,562,616
Number of Sequences: 7387702
Number of Extensions: 571315562616
Number of Successful Extensions: 339919939
Number of sequences better than 0.0: 0
|