BLASTX 7.6.2
Query= RU26806 /QuerySize=821
(820 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis ... 242 4e-062
gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa] 202 3e-050
gi|123379|sp|P26585.1|HMGL_SOYBN HMG1/2-like protein (Protein SB11) 199 2e-049
gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum ... 194 8e-048
gi|157327203|emb|CAO14484.1| unnamed protein product [Vitis vini... 190 1e-046
>gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 242 bits (615), Expect = 4e-062
Identities = 120/146 (82%), Positives = 132/146 (90%), Gaps = 2/146 (1%)
Frame = +1
Query: 133 KGGKSRAAAPKRSDTKLKTKSAGASKPAKKAGKDPNKPKRPASAFFVFMEEFREKYKKEH 312
KGGKS+ APK++DTKLK+KSAGASK + KA KDPNKPKRPASAFFVFMEEFR++YKKEH
Sbjct: 2 KGGKSK-GAPKKTDTKLKSKSAGASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKEH 60
Query: 313 PNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDNGVEEE 492
PNNKSVAAVGKAGG+KWKS+SDAEKAPY KAEKRK EYNK+M YNK+ AEG NG EEE
Sbjct: 61 PNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAEKRKTEYNKSMQAYNKRIAEGGNGAEEE 120
Query: 493 ESDKSKSEVNDEDEDDDESGGEDEDD 570
ESDKSKSEVND+DEDDDES GEDEDD
Sbjct: 121 ESDKSKSEVNDDDEDDDES-GEDEDD 145
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 202 bits (513), Expect = 3e-050
Identities = 106/151 (70%), Positives = 121/151 (80%), Gaps = 6/151 (3%)
Frame = +1
Query: 130 MKGGKSRA--AAPKRSDTKLKTK--SAGASKPAKKAGKDPNKPKRPASAFFVFMEEFREK 297
MKGG+S++ + K S K TK +A A+K + KA KDPNKPKRPASAFFVFMEEFRE+
Sbjct: 1 MKGGRSKSDTKSAKLSVNKKPTKGGAAAAAKKSGKAAKDPNKPKRPASAFFVFMEEFREQ 60
Query: 298 YKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDN 477
YKKEHP NKSVAAVGKAGG+KWKSLS AEKAPY AKA+KRKVEY K M YNK+QAEG
Sbjct: 61 YKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKADKRKVEYEKKMKAYNKEQAEGPK 120
Query: 478 GVEEEESDKSKSEVNDEDEDDDESGGEDEDD 570
EEEES+KS SEVNDEDEDD+E E++DD
Sbjct: 121 --EEEESEKSVSEVNDEDEDDEEGSAEEDDD 149
>gi|123379|sp|P26585.1|HMGL_SOYBN HMG1/2-like protein (Protein SB11)
Length = 152
Score = 199 bits (505), Expect = 2e-049
Identities = 100/153 (65%), Positives = 119/153 (77%), Gaps = 7/153 (4%)
Frame = +1
Query: 130 MKGGKSRAAAPKRSDTKLKTKSAGASKPAK------KAGKDPNKPKRPASAFFVFMEEFR 291
MKGGKS+ + KR+D KL GA+ A+ KA KDPNKPKRP SAFFVFMEEFR
Sbjct: 1 MKGGKSKTES-KRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFR 59
Query: 292 EKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 471
+ + KEHP NK+V+AVGKA G KWK++SDAEKAPY AK+EKRKVEY KNM YNKKQAEG
Sbjct: 60 KVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEG 119
Query: 472 DNGVEEEESDKSKSEVNDEDEDDDESGGEDEDD 570
G +EEES+KS SEVNDED+D++ SG E++DD
Sbjct: 120 PTGGDEEESEKSVSEVNDEDDDEEGSGEEEDDD 152
>gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 194 bits (492), Expect = 8e-048
Identities = 99/138 (71%), Positives = 110/138 (79%), Gaps = 3/138 (2%)
Frame = +1
Query: 151 AAAPKRSDTKLKT-KSAGASKPAKKAGKDPNKPKRPASAFFVFMEEFREKYKKEHPNNKS 327
A + ++DTKL K A SK AK A KDPNKPKRP SAFFVFMEEFR+ YK++HPNNKS
Sbjct: 4 AKSKAKADTKLGVRKKATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKS 63
Query: 328 VAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDNGVEEEESDKS 507
VA VGKAGG+KWK LSD EKAPYQAKAEKRK EY KNMD YNKK A GD ++EESDKS
Sbjct: 64 VAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLAAGD--ADDEESDKS 121
Query: 508 KSEVNDEDEDDDESGGED 561
KSEV+D+DEDDD S ED
Sbjct: 122 KSEVHDDDEDDDGSEQED 139
>gi|157327203|emb|CAO14484.1| unnamed protein product [Vitis vinifera]
Length = 152
Score = 190 bits (482), Expect = 1e-046
Identities = 96/146 (65%), Positives = 112/146 (76%), Gaps = 2/146 (1%)
Frame = +1
Query: 121 GSAMKGGKSRAAAPKRSDTKLKTKSAGASKPAK--KAGKDPNKPKRPASAFFVFMEEFRE 294
G + RA + R K K +A K AK KA KDPNKPKRPASAFFVFMEEFR+
Sbjct: 4 GKSKAAEVKRADSNARLSVKKKGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEEFRK 63
Query: 295 KYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGD 474
+YK++HP NKSV+ VGKAGG+KWKSLS+AEKAPY AKAEKRK EYNK+M YNK+ AEG
Sbjct: 64 QYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMAEGP 123
Query: 475 NGVEEEESDKSKSEVNDEDEDDDESG 552
EEEESDKS+SEVND++ED+DESG
Sbjct: 124 TAAEEEESDKSRSEVNDDEEDEDESG 149
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 571,315,562,616
Number of Sequences: 7387702
Number of Extensions: 571315562616
Number of Successful Extensions: 339919939
Number of sequences better than 0.0: 0
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