BLASTX 7.6.2
Query= RU26846 /QuerySize=717
(716 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157351946|emb|CAO42910.1| unnamed protein product [Vitis vini... 341 3e-092
gi|15777895|gb|AAL05932.1| SKIP5-like protein [Lycopersicon escu... 310 1e-082
gi|18410069|ref|NP_566999.1| SKIP5 (SKP1-INTERACTING PARTNER 5) ... 297 7e-079
gi|10716955|gb|AAG21980.1| SKP1 interacting partner 5 [Arabidops... 296 1e-078
gi|195648152|gb|ACG43544.1| unknown [Zea mays] 291 5e-077
>gi|157351946|emb|CAO42910.1| unnamed protein product [Vitis vinifera]
Length = 254
Score = 341 bits (874), Expect = 3e-092
Identities = 166/216 (76%), Positives = 188/216 (87%), Gaps = 3/216 (1%)
Frame = -1
Query: 653 KWKRSVPKRISSPKSSSSLSCLINNLDDGCLMHIFSFLSPIPDRYNTALVCHRWLFLACH 474
KWK S P S+SS I+NLDDGCLMHIFSFLSPIPDRYNTALVCHRW +LACH
Sbjct: 6 KWKHRKSSTSSIPNSNSS---SIHNLDDGCLMHIFSFLSPIPDRYNTALVCHRWHYLACH 62
Query: 473 PRLWLRVEQSIKDPLEPGVFPSIETAVAAARPGDPILISAGGRHLASDIQIKKPLCLIGG 294
PRLWLRV++S+KD EPGVFPSIE AV+AARPGD ILI+AGG HLAS+IQIKKPLCLIGG
Sbjct: 63 PRLWLRVDRSVKDSSEPGVFPSIEMAVSAARPGDTILIAAGGSHLASNIQIKKPLCLIGG 122
Query: 293 GELPDETTLICSRGADSALEFLSTCKLANLTVKAEPGCCLLHRSGRLTIDGCVLQCQTNP 114
GELPD+TTL+CSRG+DSALEFLSTCK+ANLTVKAE GCCLLHRSGRLTIDGC+LQC++NP
Sbjct: 123 GELPDDTTLLCSRGSDSALEFLSTCKVANLTVKAELGCCLLHRSGRLTIDGCILQCESNP 182
Query: 113 LDFLSVPIVSTASAQTLLSSSVKCYKDGVSVSLTQI 6
LD+LS PIVSTA+ +L+SSVK + D VSVS T+I
Sbjct: 183 LDYLSCPIVSTAAGPEILTSSVKSHGDSVSVSRTRI 218
>gi|15777895|gb|AAL05932.1| SKIP5-like protein [Lycopersicon esculentum]
Length = 265
Score = 310 bits (792), Expect = 1e-082
Identities = 150/209 (71%), Positives = 179/209 (85%), Gaps = 3/209 (1%)
Frame = -1
Query: 632 KRISSPKSSSSLSCLINNLDDGCLMHIFSFLSPIPDRYNTALVCHRWLFLACHPRLWLRV 453
+RIS K S+ +S LIN+LDDGCLMHIFSFLSPIPDRYNTALVCHRW FLACHPRLWLRV
Sbjct: 9 RRIS--KISTDIS-LINSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRFLACHPRLWLRV 65
Query: 452 EQSIKDPLEPGVFPSIETAVAAARPGDPILISAGGRHLASDIQIKKPLCLIGGGELPDET 273
++++KD +PGV+P+IE AV+AARPGD ILI+AGG H S+IQI+KPLCLIG GE PD+T
Sbjct: 66 DRAVKDLSQPGVYPNIEMAVSAARPGDTILIAAGGSHHVSNIQIEKPLCLIGAGESPDDT 125
Query: 272 TLICSRGADSALEFLSTCKLANLTVKAEPGCCLLHRSGRLTIDGCVLQCQTNPLDFLSVP 93
TLICSRG+DSALEF+STCKLANLTV+ E GCCLLHRSG+LT+DGC+LQC++NPLD LS
Sbjct: 126 TLICSRGSDSALEFMSTCKLANLTVRTELGCCLLHRSGKLTVDGCILQCESNPLDHLSYA 185
Query: 92 IVSTASAQTLLSSSVKCYKDGVSVSLTQI 6
I+STA A ++ S++K D VSV TQI
Sbjct: 186 IISTAGAAEVIPSALKTCSDAVSVLKTQI 214
>gi|18410069|ref|NP_566999.1| SKIP5 (SKP1-INTERACTING PARTNER 5) [Arabidopsis
thaliana]
Length = 274
Score = 297 bits (759), Expect = 7e-079
Identities = 143/190 (75%), Positives = 163/190 (85%), Gaps = 4/190 (2%)
Frame = -1
Query: 632 KRISSPKSSSSLSCLINNLDDGCLMHIFSFLSPIPDRYNTALVCHRWLFLACHPRLWLRV 453
K+ P S +SL NNLDDGCLMHI SFLSPIPDRYNTALVCHRW +LACHPRLWLRV
Sbjct: 24 KKRMKPYSLTSL----NNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWLRV 79
Query: 452 EQSIKDPLEPGVFPSIETAVAAARPGDPILISAGGRHLASDIQIKKPLCLIGGGELPDET 273
++ +KD +PGVF +IE+AV+AARPGD ILI AGG + S+IQIKKPLCL+GGGE+PDET
Sbjct: 80 DRFVKDLSQPGVFLNIESAVSAARPGDTILIVAGGNYRVSNIQIKKPLCLVGGGEIPDET 139
Query: 272 TLICSRGADSALEFLSTCKLANLTVKAEPGCCLLHRSGRLTIDGCVLQCQTNPLDFLSVP 93
TL+C+RG+DSALE LSTCKLANLTVKAE GCCLLHRSGRLTIDGCVLQC+TNPLD LS P
Sbjct: 140 TLVCARGSDSALELLSTCKLANLTVKAELGCCLLHRSGRLTIDGCVLQCETNPLDHLSCP 199
Query: 92 IVSTASAQTL 63
IVSTA + +
Sbjct: 200 IVSTAGDEDI 209
>gi|10716955|gb|AAG21980.1| SKP1 interacting partner 5 [Arabidopsis thaliana]
Length = 252
Score = 296 bits (757), Expect = 1e-078
Identities = 138/175 (78%), Positives = 157/175 (89%)
Frame = -1
Query: 587 INNLDDGCLMHIFSFLSPIPDRYNTALVCHRWLFLACHPRLWLRVEQSIKDPLEPGVFPS 408
+NNLDDGCLMHI SFLSPIPDRYNTALVCHRW +LACHPRLWLRV++ +KD +PGVF +
Sbjct: 13 LNNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWLRVDRFVKDLSQPGVFLN 72
Query: 407 IETAVAAARPGDPILISAGGRHLASDIQIKKPLCLIGGGELPDETTLICSRGADSALEFL 228
IE+AV+AARPGD ILI AGG + S+IQIKKPLCL+GGGE+PDETTL+C+RG+DSALE L
Sbjct: 73 IESAVSAARPGDTILIVAGGNYRVSNIQIKKPLCLVGGGEIPDETTLVCARGSDSALELL 132
Query: 227 STCKLANLTVKAEPGCCLLHRSGRLTIDGCVLQCQTNPLDFLSVPIVSTASAQTL 63
STCKLANLTVKAE GCCLLHRSGRLTIDGCVLQC+TNPLD LS PIVSTA + +
Sbjct: 133 STCKLANLTVKAELGCCLLHRSGRLTIDGCVLQCETNPLDHLSCPIVSTAGDEDI 187
>gi|195648152|gb|ACG43544.1| unknown [Zea mays]
Length = 254
Score = 291 bits (743), Expect = 5e-077
Identities = 138/194 (71%), Positives = 163/194 (84%), Gaps = 1/194 (0%)
Frame = -1
Query: 587 INNLDDGCLMHIFSFLSPIPDRYNTALVCHRWLFLACHPRLWLRVEQSIKDPLEPGVFPS 408
+N+LDDGCLMHIFSFLSPIPDRYNTALVCHRW FLACHPRLWLRVE+ I+D +EPGV+P
Sbjct: 20 MNSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRFLACHPRLWLRVERPIRDAMEPGVYPD 79
Query: 407 IETAVAAARPGDPILISAGGRHLASDIQIKKPLCLIGGGELPDETTLICSRGADSALEFL 228
+E AV+AARPGD ILI+AGG H+A +IQIKKP+C+IGGG+LPD+T L CSRG D+ALEFL
Sbjct: 80 LEAAVSAARPGDTILIAAGGSHVACNIQIKKPICIIGGGDLPDDTVLTCSRGFDNALEFL 139
Query: 227 STCKLANLTVKAEPGCCLLHRSGRLTIDGCVLQCQTNPLDFLSVPIVSTASAQTLLSSSV 48
STCK+ANLT++AE GCCLLHR GRLTI C+LQC+ NPLD LS PI+STA SS+
Sbjct: 140 STCKIANLTIRAELGCCLLHRGGRLTIQECLLQCEQNPLDHLSFPIISTAIEYDPF-SSL 198
Query: 47 KCYKDGVSVSLTQI 6
K GV+V T+I
Sbjct: 199 KEQGHGVTVVRTRI 212
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 571,315,562,616
Number of Sequences: 7387702
Number of Extensions: 571315562616
Number of Successful Extensions: 339919939
Number of sequences better than 0.0: 0
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