BLASTX 7.6.2
Query= RU26902 /QuerySize=504
(503 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis ... 124 4e-027
gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum ... 119 1e-025
gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa] 118 2e-025
gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum] 116 9e-025
gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana] 114 3e-024
>gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 124 bits (309), Expect = 4e-027
Identities = 60/101 (59%), Positives = 72/101 (71%)
Frame = +3
Query: 180 KVKDQKRWGEQASQEGWERSKQA*EACECLLVFMEEFREKYKKEHPNNKSVAAVGKAGGE 359
K+K + + S + + + VFMEEFR++YKKEHPNNKSVAAVGKAGG+
Sbjct: 16 KLKSKSAGASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGD 75
Query: 360 KWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDNG 482
KWKS+SDAEKAPY KAEKRK EYNK+M YNK+ AEG NG
Sbjct: 76 KWKSMSDAEKAPYINKAEKRKTEYNKSMQAYNKRIAEGGNG 116
>gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 119 bits (297), Expect = 1e-025
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = +3
Query: 273 VFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVY 452
VFMEEFR+ YK++HPNNKSVA VGKAGG+KWK LSD EKAPYQAKAEKRK EY KNMD Y
Sbjct: 45 VFMEEFRKTYKEKHPNNKSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAY 104
Query: 453 NKKQAEGD 476
NKK A GD
Sbjct: 105 NKKLAAGD 112
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 118 bits (294), Expect = 2e-025
Identities = 56/67 (83%), Positives = 60/67 (89%)
Frame = +3
Query: 273 VFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVY 452
VFMEEFRE+YKKEHP NKSVAAVGKAGG+KWKSLS AEKAPY AKA+KRKVEY K M Y
Sbjct: 52 VFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKADKRKVEYEKKMKAY 111
Query: 453 NKKQAEG 473
NK+QAEG
Sbjct: 112 NKEQAEG 118
>gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 116 bits (289), Expect = 9e-025
Identities = 53/65 (81%), Positives = 59/65 (90%)
Frame = +3
Query: 273 VFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVY 452
VFMEEFR+ YK++HPNNKSVAAVGKAGG+ WK LS+AEKAPYQAKAEKRK EY KNMD Y
Sbjct: 45 VFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMDAY 104
Query: 453 NKKQA 467
N+KQA
Sbjct: 105 NRKQA 109
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 114 bits (284), Expect = 3e-024
Identities = 54/67 (80%), Positives = 58/67 (86%)
Frame = +3
Query: 273 VFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVY 452
VFME+FR YK+EHP NKSVAAVGKAGGEKWKSLSD+EKAPY AKA+KRKVEY KNM Y
Sbjct: 565 VFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAY 624
Query: 453 NKKQAEG 473
NKK EG
Sbjct: 625 NKKLEEG 631
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 610,480,162,245
Number of Sequences: 7387702
Number of Extensions: 610480162245
Number of Successful Extensions: 349624587
Number of sequences better than 0.0: 0
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