BLASTX 7.6.2
Query= RU27382 /QuerySize=717
(716 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118482974|gb|ABK93399.1| unknown [Populus trichocarpa] 279 1e-073
gi|117671302|gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar] 278 2e-073
gi|24817254|emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum] 278 4e-073
gi|1856971|dbj|BAA05057.1| cyc07 [Catharanthus roseus] 276 1e-072
gi|1350984|sp|P49198|RS3A_HELAN 40S ribosomal protein S3a 275 2e-072
>gi|118482974|gb|ABK93399.1| unknown [Populus trichocarpa]
Length = 261
Score = 279 bits (713), Expect = 1e-073
Identities = 139/163 (85%), Positives = 148/163 (90%)
Frame = +2
Query: 218 TRTQGTKIASEGLKHRVFEISLADLQKDEDHAYRKIRLRAEDVQGKDVLTNFWGIDFATD 397
TRTQGTKIASEGLKHRVFE+SLADLQ DEDHA+RKIRLRAEDVQG++VLTNFWG+ F TD
Sbjct: 49 TRTQGTKIASEGLKHRVFEVSLADLQNDEDHAFRKIRLRAEDVQGRNVLTNFWGMSFTTD 108
Query: 398 KLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKM 577
KLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKR NQVKRTCYAQSSQIRQIRRKM
Sbjct: 109 KLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRCPNQVKRTCYAQSSQIRQIRRKM 168
Query: 578 REIMVNQASACDLKELVQKFIPEMIGREIGKGYIQHLPTGRVF 706
REIMVNQAS+CDLK+LVQKFIPE+IG+EI K P VF
Sbjct: 169 REIMVNQASSCDLKDLVQKFIPEVIGKEIEKATTGIYPLQNVF 211
>gi|117671302|gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
Length = 261
Score = 278 bits (711), Expect = 2e-073
Identities = 138/167 (82%), Positives = 148/167 (88%)
Frame = +2
Query: 206 KPSFTRTQGTKIASEGLKHRVFEISLADLQKDEDHAYRKIRLRAEDVQGKDVLTNFWGID 385
K +RTQGTKIASEGLKHRVFEISLADLQ DED +YRKIRLRAEDVQGK+VLTNFWG+D
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQSYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 386 FATDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQI 565
F TDKLRSLVRKWQTLIEAH+DVKTTDNYTLR+FCI FTKRR NQVKRTCYAQ+SQIRQI
Sbjct: 105 FTTDKLRSLVRKWQTLIEAHIDVKTTDNYTLRLFCIGFTKRRPNQVKRTCYAQTSQIRQI 164
Query: 566 RRKMREIMVNQASACDLKELVQKFIPEMIGREIGKGYIQHLPTGRVF 706
RRKMREIM NQAS+CDLKELVQKFIPE+IG+EI K P VF
Sbjct: 165 RRKMREIMTNQASSCDLKELVQKFIPEVIGKEIEKATTSIYPLQNVF 211
>gi|24817254|emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum]
Length = 261
Score = 278 bits (709), Expect = 4e-073
Identities = 140/167 (83%), Positives = 151/167 (90%)
Frame = +2
Query: 206 KPSFTRTQGTKIASEGLKHRVFEISLADLQKDEDHAYRKIRLRAEDVQGKDVLTNFWGID 385
K +RTQGTKIASEGLKHRVFEISLADLQ DED+A+RKIRLRAEDVQGK+VLTNF+G+D
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEISLADLQGDEDNAFRKIRLRAEDVQGKNVLTNFYGMD 104
Query: 386 FATDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQI 565
F TDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI FTKRR+NQVKRTCYAQSSQIRQI
Sbjct: 105 FTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQI 164
Query: 566 RRKMREIMVNQASACDLKELVQKFIPEMIGREIGKGYIQHLPTGRVF 706
RRKMREIMVNQA++CDLKELV+KFIPEMIG+EI K P VF
Sbjct: 165 RRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVF 211
>gi|1856971|dbj|BAA05057.1| cyc07 [Catharanthus roseus]
Length = 245
Score = 276 bits (705), Expect = 1e-072
Identities = 138/167 (82%), Positives = 148/167 (88%)
Frame = +2
Query: 206 KPSFTRTQGTKIASEGLKHRVFEISLADLQKDEDHAYRKIRLRAEDVQGKDVLTNFWGID 385
K TRTQGTKIASEGLKHRVFEISLADLQ DEDH++RKIRLRAED+QGK+VLTNFWG+D
Sbjct: 45 KTLVTRTQGTKIASEGLKHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMD 104
Query: 386 FATDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQI 565
F TDKLRSLVRKWQ+LIEAHVDVKTTD+YTLRMFCI FTK+RANQ KRTCYAQSSQIRQI
Sbjct: 105 FTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQI 164
Query: 566 RRKMREIMVNQASACDLKELVQKFIPEMIGREIGKGYIQHLPTGRVF 706
RRKMREIMVNQA +CDLK+LVQKFIPE IGREI K P VF
Sbjct: 165 RRKMREIMVNQAPSCDLKDLVQKFIPESIGREIEKATPSIYPLQNVF 211
>gi|1350984|sp|P49198|RS3A_HELAN 40S ribosomal protein S3a
Length = 260
Score = 275 bits (703), Expect = 2e-072
Identities = 137/167 (82%), Positives = 146/167 (87%)
Frame = +2
Query: 206 KPSFTRTQGTKIASEGLKHRVFEISLADLQKDEDHAYRKIRLRAEDVQGKDVLTNFWGID 385
K TRTQGTKIASEGLKHRVFE+SLADLQ DEDH+YRKIRLRAEDVQGK+VLTNFWG+D
Sbjct: 45 KTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMD 104
Query: 386 FATDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQI 565
TDKLRSLV+KWQ+LIEAHVDVKTTDN+TLRMFCI FTK+RANQVKRTCYAQSSQI+QI
Sbjct: 105 VTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQI 164
Query: 566 RRKMREIMVNQASACDLKELVQKFIPEMIGREIGKGYIQHLPTGRVF 706
RRKMREIMV QA CDLKELVQKFIPE IGREI K P VF
Sbjct: 165 RRKMREIMVTQAQTCDLKELVQKFIPESIGREIEKATSSIYPLQNVF 211
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 610,480,162,245
Number of Sequences: 7387702
Number of Extensions: 610480162245
Number of Successful Extensions: 349624587
Number of sequences better than 0.0: 0
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