BLASTX 7.6.2
Query= RU27758 /QuerySize=507
(506 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15238647|ref|NP_200833.1| zinc finger (C3HC4-type RING finger... 135 2e-030
gi|51969324|dbj|BAD43354.1| unknown protein [Arabidopsis thaliana] 135 2e-030
gi|157337449|emb|CAO21795.1| unnamed protein product [Vitis vini... 132 2e-029
gi|113205181|gb|AAT40530.2| zinc finger family protein, putative... 97 3e-019
gi|147790780|emb|CAN61821.1| hypothetical protein [Vitis vinifera] 94 5e-018
>gi|15238647|ref|NP_200833.1| zinc finger (C3HC4-type RING finger) family
protein [Arabidopsis thaliana]
Length = 655
Score = 135 bits (338), Expect = 2e-030
Identities = 71/137 (51%), Positives = 94/137 (68%), Gaps = 1/137 (0%)
Frame = +3
Query: 99 GSSAAAAAASVESEEGEFRLYFKGLVSEEQ-VGDQKLVLAGIGVAICDPKDNLVFEVRKP 275
GSS AA + +RLYFKGLVS+E G V++G GVAICD +DNL+FE++ P
Sbjct: 128 GSSRVNTAAGKINGNLLYRLYFKGLVSDENGKGKMTDVVSGFGVAICDQRDNLLFEMKGP 187
Query: 276 LIGNGLSRNSAQLKALIEGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVN 455
LI NG+SR A+LKALI GLT A+ LG+K I FF D+YPIFQ+V GKW AKQ+K+ L++
Sbjct: 188 LIDNGMSRQGAELKALIRGLTEALKLGIKHIVFFCDSYPIFQYVTGKWMAKQKKISLLLD 247
Query: 456 QVKSLRSKFTQCNSRLV 506
++S+ F+ LV
Sbjct: 248 DLQSIMQHFSSYQHVLV 264
>gi|51969324|dbj|BAD43354.1| unknown protein [Arabidopsis thaliana]
Length = 649
Score = 135 bits (338), Expect = 2e-030
Identities = 71/137 (51%), Positives = 94/137 (68%), Gaps = 1/137 (0%)
Frame = +3
Query: 99 GSSAAAAAASVESEEGEFRLYFKGLVSEEQ-VGDQKLVLAGIGVAICDPKDNLVFEVRKP 275
GSS AA + +RLYFKGLVS+E G V++G GVAICD +DNL+FE++ P
Sbjct: 122 GSSRVNTAAGKINGNLLYRLYFKGLVSDENGKGKMTDVVSGFGVAICDQRDNLLFEMKGP 181
Query: 276 LIGNGLSRNSAQLKALIEGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVN 455
LI NG+SR A+LKALI GLT A+ LG+K I FF D+YPIFQ+V GKW AKQ+K+ L++
Sbjct: 182 LIDNGMSRQGAELKALIRGLTEALKLGIKHIVFFCDSYPIFQYVTGKWMAKQKKISLLLD 241
Query: 456 QVKSLRSKFTQCNSRLV 506
++S+ F+ LV
Sbjct: 242 DLQSIMQHFSSYQHVLV 258
>gi|157337449|emb|CAO21795.1| unnamed protein product [Vitis vinifera]
Length = 557
Score = 132 bits (330), Expect = 2e-029
Identities = 65/125 (52%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
Frame = +3
Query: 135 SEEGE-FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQ 311
S GE FR++FKGL EE++G+ + + GIGV+ICD +DNLVFE++KPL+G G S A+
Sbjct: 141 SSSGEVFRVFFKGLAREEKIGNSREPIMGIGVSICDFRDNLVFELQKPLVGCGKSHEYAE 200
Query: 312 LKALIEGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFTQC 491
+A+IE L AA++L L R+ F D+ P++Q V GKWP K RK+ L++QV LR KFT C
Sbjct: 201 TRAMIEALNAALALDLTRVDLFCDHQPLYQRVRGKWPPKNRKIAALLDQVAVLRKKFTYC 260
Query: 492 NSRLV 506
N LV
Sbjct: 261 NLFLV 265
>gi|113205181|gb|AAT40530.2| zinc finger family protein, putative [Solanum
demissum]
Length = 596
Score = 97 bits (241), Expect = 3e-019
Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 7/113 (6%)
Frame = +3
Query: 132 ESEEGE-FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSA 308
+SE+ E FR+YFKGLV + + GIGVAICD +D L+FE+RKP GN ++R
Sbjct: 148 KSEDKELFRVYFKGLVEN---FPPNVFIGGIGVAICDSRDELLFEMRKPFFGNAMNRQCI 204
Query: 309 QLKALIEGLTAAVSLGLKRITFFGDNYPIFQFV---NGKWPAKQRKVVNLVNQ 458
+ KALIEGL AA++L L+R+ F+ D +PIFQF+ + KW ++V + Q
Sbjct: 205 EFKALIEGLNAAIALDLRRVVFYCDYFPIFQFLYINDVKWYRTSKRVSDKFGQ 257
>gi|147790780|emb|CAN61821.1| hypothetical protein [Vitis vinifera]
Length = 251
Score = 94 bits (231), Expect = 5e-018
Identities = 45/90 (50%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Frame = +3
Query: 135 SEEGE-FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQ 311
S GE FR++FKGL EE++G+ + + GIGV+ICD +DNLVFE++KPL+G G S A+
Sbjct: 141 SSSGEVFRVFFKGLAREEKIGNSREPIMGIGVSICDFRDNLVFELQKPLVGCGKSHEYAE 200
Query: 312 LKALIEGLTAAVSLGLKRITFFGDNYPIFQ 401
+A+IE L AA++L L R+ F D+ P++Q
Sbjct: 201 TRAMIEALNAALALDLTRVDLFCDHQPLYQ 230
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 610,480,162,245
Number of Sequences: 7387702
Number of Extensions: 610480162245
Number of Successful Extensions: 349624587
Number of sequences better than 0.0: 0
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