BLASTX 7.6.2
Query= RU29054 /QuerySize=240
(239 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157339738|emb|CAO44279.1| unnamed protein product [Vitis vini... 151 2e-035
gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported... 141 2e-032
gi|18400745|ref|NP_565587.1| PKL (PICKLE) [Arabidopsis thaliana] 141 2e-032
gi|110738692|dbj|BAF01271.1| putative chromodomain-helicase-DNA-... 141 2e-032
gi|168051599|ref|XP_001778241.1| SNF2 family DNA-dependent ATPas... 133 4e-030
>gi|157339738|emb|CAO44279.1| unnamed protein product [Vitis vinifera]
Length = 692
Score = 151 bits (379), Expect = 2e-035
Identities = 74/79 (93%), Positives = 77/79 (97%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LEEFQEEFKDINQEEQISRLHK+LAPHLLRRVKKDVMKELPPKKELILR+ELSSKQKEYY
Sbjct: 477 LEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY 536
Query: 58 KAILTRNYQILTRRGGGML 2
KAILTRNYQILTRRGG +
Sbjct: 537 KAILTRNYQILTRRGGAQI 555
>gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported] - Arabidopsis
thaliana
Length = 1359
Score = 141 bits (353), Expect = 2e-032
Identities = 66/79 (83%), Positives = 75/79 (94%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LEEFQEEFKDINQEEQISRLHK+LAPHLLRRVKKDVMK++PPKKELILR++LSS QKEYY
Sbjct: 476 LEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYY 535
Query: 58 KAILTRNYQILTRRGGGML 2
KAI TRNYQ+LT++GG +
Sbjct: 536 KAIFTRNYQVLTKKGGAQI 554
>gi|18400745|ref|NP_565587.1| PKL (PICKLE) [Arabidopsis thaliana]
Length = 1384
Score = 141 bits (353), Expect = 2e-032
Identities = 66/79 (83%), Positives = 75/79 (94%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LEEFQEEFKDINQEEQISRLHK+LAPHLLRRVKKDVMK++PPKKELILR++LSS QKEYY
Sbjct: 476 LEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYY 535
Query: 58 KAILTRNYQILTRRGGGML 2
KAI TRNYQ+LT++GG +
Sbjct: 536 KAIFTRNYQVLTKKGGAQI 554
>gi|110738692|dbj|BAF01271.1| putative chromodomain-helicase-DNA-binding protein
[Arabidopsis thaliana]
Length = 966
Score = 141 bits (353), Expect = 2e-032
Identities = 66/79 (83%), Positives = 75/79 (94%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LEEFQEEFKDINQEEQISRLHK+LAPHLLRRVKKDVMK++PPKKELILR++LSS QKEYY
Sbjct: 58 LEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYY 117
Query: 58 KAILTRNYQILTRRGGGML 2
KAI TRNYQ+LT++GG +
Sbjct: 118 KAIFTRNYQVLTKKGGAQI 136
>gi|168051599|ref|XP_001778241.1| SNF2 family DNA-dependent ATPase
[Physcomitrella patens subsp. patens]
Length = 1245
Score = 133 bits (334), Expect = 4e-030
Identities = 62/76 (81%), Positives = 73/76 (96%)
Frame = -2
Query: 238 LEEFQEEFKDINQEEQISRLHKILAPHLLRRVKKDVMKELPPKKELILRIELSSKQKEYY 59
LEEFQ+EF+DINQEEQ+ RLHK+LAPHLLRRVKKDV+KE+PPKKELILR+ELSS QKE+Y
Sbjct: 499 LEEFQQEFQDINQEEQVGRLHKMLAPHLLRRVKKDVLKEMPPKKELILRVELSSLQKEFY 558
Query: 58 KAILTRNYQILTRRGG 11
KAILT+NYQIL ++GG
Sbjct: 559 KAILTKNYQILAKQGG 574
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 610,480,162,245
Number of Sequences: 7387702
Number of Extensions: 610480162245
Number of Successful Extensions: 349624587
Number of sequences better than 0.0: 0
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