BLASTX 7.6.2
Query= RU33683 /QuerySize=201
(200 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|4914322|gb|AAD32870.1|AC005489_8 F14N23.8 [Arabidopsis thaliana] 114 3e-024
gi|15218450|ref|NP_172491.1| WLIM1; transcription factor [Arabid... 114 3e-024
gi|147785329|emb|CAN72849.1| hypothetical protein [Vitis vinifera] 114 3e-024
gi|78927023|gb|ABB51614.1| LIM-domain protein [Brassica napus] 109 8e-023
gi|117950169|gb|ABK58468.1| LIM domain protein WLIM1b [Populus t... 107 4e-022
>gi|4914322|gb|AAD32870.1|AC005489_8 F14N23.8 [Arabidopsis thaliana]
Length = 223
Score = 114 bits (284), Expect = 3e-024
Identities = 51/61 (83%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Frame = -2
Query: 199 YHKMCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGGGDH--DEKVVG 26
YHK CFKCTHGGCTISPSNYIAHEG+LYCKHHH QLIKEKGNLSQLEGGG++ +KVV
Sbjct: 163 YHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGENAAKDKVVA 222
Query: 25 A 23
A
Sbjct: 223 A 223
>gi|15218450|ref|NP_172491.1| WLIM1; transcription factor [Arabidopsis
thaliana]
Length = 190
Score = 114 bits (284), Expect = 3e-024
Identities = 51/61 (83%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Frame = -2
Query: 199 YHKMCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGGGDH--DEKVVG 26
YHK CFKCTHGGCTISPSNYIAHEG+LYCKHHH QLIKEKGNLSQLEGGG++ +KVV
Sbjct: 130 YHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGENAAKDKVVA 189
Query: 25 A 23
A
Sbjct: 190 A 190
>gi|147785329|emb|CAN72849.1| hypothetical protein [Vitis vinifera]
Length = 197
Score = 114 bits (283), Expect = 3e-024
Identities = 55/68 (80%), Positives = 57/68 (83%), Gaps = 4/68 (5%)
Frame = -2
Query: 199 YHKMCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGGGDHD---EKVV 29
YHK CFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG + D EKV
Sbjct: 130 YHKSCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGDHEKDTANEKVN 189
Query: 28 GATEIAPE 5
G E+A E
Sbjct: 190 G-REVAAE 196
>gi|78927023|gb|ABB51614.1| LIM-domain protein [Brassica napus]
Length = 189
Score = 109 bits (271), Expect = 8e-023
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = -2
Query: 199 YHKMCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGGGDHDEKVVGA 23
YHK CFKCTHGGCTISPSNYIAHEG+LYCKHHH QLIKEKGNLSQLEGG + + V A
Sbjct: 130 YHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGDNAAKDKVDA 188
>gi|117950169|gb|ABK58468.1| LIM domain protein WLIM1b [Populus tremula x
Populus alba]
Length = 197
Score = 107 bits (265), Expect = 4e-022
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = -2
Query: 199 YHKMCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGGGDHD 41
YHK CFKC HGGCTISPSNYIAHEGRLYCKHHH QLIKEKGNLSQLEG + D
Sbjct: 130 YHKSCFKCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDVEKD 182
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 652,910,913,070
Number of Sequences: 7387702
Number of Extensions: 652910913070
Number of Successful Extensions: 368049500
Number of sequences better than 0.0: 0
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