BLASTX 7.6.2
Query= RU35518 /QuerySize=257
(256 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|29346647|ref|NP_810150.1| two-component system sensor histidi... 158 2e-037
gi|212699342|ref|ZP_03307470.1| hypothetical protein BACFIN_0180... 148 2e-034
gi|160882577|ref|ZP_02063580.1| hypothetical protein BACOVA_0053... 147 3e-034
gi|153806801|ref|ZP_01959469.1| hypothetical protein BACCAC_0107... 146 6e-034
gi|160889665|ref|ZP_02070668.1| hypothetical protein BACUNI_0209... 124 2e-027
>gi|29346647|ref|NP_810150.1| two-component system sensor histidine kinase
[Bacteroides thetaiotaomicron VPI-5482]
Length = 641
Score = 158 bits (397), Expect = 2e-037
Identities = 74/75 (98%)
Frame = +3
Query: 3 AVFSVTDTGCGIPKEKQKLVFERFEKLNEYAQGTGLGLSICKLIVHKWKGDIWIDFEYTG 182
AVFSVTDTGCGIPKEKQKLVFERFEKLNEYAQGTGLGLSICKLIVHKWKGDIWID EYTG
Sbjct: 567 AVFSVTDTGCGIPKEKQKLVFERFEKLNEYAQGTGLGLSICKLIVHKWKGDIWIDSEYTG 626
Query: 183 GARFMFSHPLKIEKE 227
GARFMFSHPLKIEKE
Sbjct: 627 GARFMFSHPLKIEKE 641
>gi|212699342|ref|ZP_03307470.1| hypothetical protein BACFIN_01808 [Bacteroides
finegoldii DSM 17565]
Length = 625
Score = 148 bits (371), Expect = 2e-034
Identities = 70/75 (93%), Positives = 72/75 (96%)
Frame = +3
Query: 3 AVFSVTDTGCGIPKEKQKLVFERFEKLNEYAQGTGLGLSICKLIVHKWKGDIWIDFEYTG 182
AVFSVTDTGCGIPKEKQKLVFERFEKLNEYAQGTGLGLSICKLIV KWKG IWID +YTG
Sbjct: 551 AVFSVTDTGCGIPKEKQKLVFERFEKLNEYAQGTGLGLSICKLIVSKWKGAIWIDPDYTG 610
Query: 183 GARFMFSHPLKIEKE 227
GARF+FSHPLKIEKE
Sbjct: 611 GARFIFSHPLKIEKE 625
>gi|160882577|ref|ZP_02063580.1| hypothetical protein BACOVA_00530 [Bacteroides
ovatus ATCC 8483]
Length = 674
Score = 147 bits (369), Expect = 3e-034
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = +3
Query: 3 AVFSVTDTGCGIPKEKQKLVFERFEKLNEYAQGTGLGLSICKLIVHKWKGDIWIDFEYTG 182
A+FSVTDTGCGIPKEKQ LVFERFEKLNEYAQGTGLGLSICKLIVHKWKG IWID +YTG
Sbjct: 600 AIFSVTDTGCGIPKEKQGLVFERFEKLNEYAQGTGLGLSICKLIVHKWKGSIWIDPDYTG 659
Query: 183 GARFMFSHPLKIEKE 227
GARF+FSHPL IEKE
Sbjct: 660 GARFVFSHPLNIEKE 674
>gi|153806801|ref|ZP_01959469.1| hypothetical protein BACCAC_01075 [Bacteroides
caccae ATCC 43185]
Length = 623
Score = 146 bits (367), Expect = 6e-034
Identities = 68/75 (90%), Positives = 72/75 (96%)
Frame = +3
Query: 3 AVFSVTDTGCGIPKEKQKLVFERFEKLNEYAQGTGLGLSICKLIVHKWKGDIWIDFEYTG 182
AVFSVTDTGCGIPKEKQ LVFERFEKLNEYAQGTGLGLSICKLIV+KWKG+IWID +YTG
Sbjct: 549 AVFSVTDTGCGIPKEKQALVFERFEKLNEYAQGTGLGLSICKLIVYKWKGEIWIDPDYTG 608
Query: 183 GARFMFSHPLKIEKE 227
GARF+FSHPL IEKE
Sbjct: 609 GARFVFSHPLNIEKE 623
>gi|160889665|ref|ZP_02070668.1| hypothetical protein BACUNI_02092 [Bacteroides
uniformis ATCC 8492]
Length = 585
Score = 124 bits (311), Expect = 2e-027
Identities = 57/72 (79%), Positives = 62/72 (86%)
Frame = +3
Query: 3 AVFSVTDTGCGIPKEKQKLVFERFEKLNEYAQGTGLGLSICKLIVHKWKGDIWIDFEYTG 182
AVFSVTDTGCGIP +KQK VFERFEKLNEY QGTGLGLSICKL V KW G+IWID YT
Sbjct: 514 AVFSVTDTGCGIPLDKQKRVFERFEKLNEYVQGTGLGLSICKLTVEKWGGEIWIDPAYTD 573
Query: 183 GARFMFSHPLKI 218
GARFMF+HP+ +
Sbjct: 574 GARFMFTHPMNL 585
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,204,853,022
Number of Sequences: 7387702
Number of Extensions: 6204853022
Number of Successful Extensions: 8599270
Number of sequences better than 0.0: 0
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