BLASTX 7.6.2
Query= RU36176 /QuerySize=179
(178 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18402799|ref|NP_566670.1| CCAAT-binding transcription factor ... 71 2e-011
gi|9293997|dbj|BAB01900.1| CCAAT-binding transcription factor B ... 71 2e-011
gi|1586551|prf||2204247A CCAAT-binding factor:SUBUNIT=B 67 5e-010
gi|1173618|gb|AAC49266.1| CCAAT-binding factor B subunit homolog 67 5e-010
gi|1173616|gb|AAC49265.1| CCAAT-binding factor B subunit homolog 67 5e-010
>gi|18402799|ref|NP_566670.1| CCAAT-binding transcription factor (CBF-B/NF-YA)
family protein [Arabidopsis thaliana]
Length = 303
Score = 71 bits (173), Expect = 2e-011
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1
Query: 55 GYPPFVGVPHARMPLPLEMAQEPVYVNAKQYQGILRRRQAR 177
G+ P+ G+PH+RMPLP EMAQEPV+VNAKQYQ ILRRRQAR
Sbjct: 145 GFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQAR 185
>gi|9293997|dbj|BAB01900.1| CCAAT-binding transcription factor B subunit
[Arabidopsis thaliana]
Length = 298
Score = 71 bits (173), Expect = 2e-011
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1
Query: 55 GYPPFVGVPHARMPLPLEMAQEPVYVNAKQYQGILRRRQAR 177
G+ P+ G+PH+RMPLP EMAQEPV+VNAKQYQ ILRRRQAR
Sbjct: 140 GFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQAR 180
>gi|1586551|prf||2204247A CCAAT-binding factor:SUBUNIT=B
Length = 315
Score = 67 bits (161), Expect = 5e-010
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 58 YPPFVGVPHARMPLPLEMAQEPVYVNAKQYQGILRRRQAR 177
Y P G+PH+RM LP EMAQEPVYVNAKQYQ I+RRRQAR
Sbjct: 158 YVPHGGMPHSRMQLPPEMAQEPVYVNAKQYQAIMRRRQAR 197
>gi|1173618|gb|AAC49266.1| CCAAT-binding factor B subunit homolog
Length = 303
Score = 67 bits (161), Expect = 5e-010
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 58 YPPFVGVPHARMPLPLEMAQEPVYVNAKQYQGILRRRQAR 177
Y P G+PH+RM LP EMAQEPVYVNAKQYQ I+RRRQAR
Sbjct: 146 YVPHGGMPHSRMQLPPEMAQEPVYVNAKQYQAIMRRRQAR 185
>gi|1173616|gb|AAC49265.1| CCAAT-binding factor B subunit homolog
Length = 314
Score = 67 bits (161), Expect = 5e-010
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 58 YPPFVGVPHARMPLPLEMAQEPVYVNAKQYQGILRRRQAR 177
Y P G+PH+RM LP EMAQEPVYVNAKQYQ I+RRRQAR
Sbjct: 157 YVPHGGMPHSRMQLPPEMAQEPVYVNAKQYQAIMRRRQAR 196
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,104,830,980
Number of Sequences: 7387702
Number of Extensions: 43104830980
Number of Successful Extensions: 18401489
Number of sequences better than 0.0: 0
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