BLASTX 7.6.2
Query= RU40159 /QuerySize=228
(227 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|212692453|ref|ZP_03300581.1| hypothetical protein BACDOR_0194... 152 1e-035
gi|150003705|ref|YP_001298449.1| two-component system sensor his... 150 3e-035
gi|189464175|ref|ZP_03012960.1| hypothetical protein BACINT_0051... 120 5e-026
gi|198274384|ref|ZP_03206916.1| hypothetical protein BACPLE_0052... 100 5e-020
gi|29348332|ref|NP_811835.1| two-component system sensor histidi... 82 8e-015
>gi|212692453|ref|ZP_03300581.1| hypothetical protein BACDOR_01949 [Bacteroides
dorei DSM 17855]
Length = 1328
Score = 152 bits (382), Expect = 1e-035
Identities = 75/75 (100%)
Frame = -3
Query: 225 DLSGSPIKHKPTMLIVDDNEEMLNFLSSSLADKYSILTAEDGIEALNKLKENEVTLIVSD 46
DLSGSPIKHKPTMLIVDDNEEMLNFLSSSLADKYSILTAEDGIEALNKLKENEVTLIVSD
Sbjct: 1067 DLSGSPIKHKPTMLIVDDNEEMLNFLSSSLADKYSILTAEDGIEALNKLKENEVTLIVSD 1126
Query: 45 WMMPRMDGVEFCKAI 1
WMMPRMDGVEFCKAI
Sbjct: 1127 WMMPRMDGVEFCKAI 1141
>gi|150003705|ref|YP_001298449.1| two-component system sensor histidine
kinase/response regulator, hybrid [Bacteroides vulgatus ATCC 8482]
Length = 1328
Score = 150 bits (378), Expect = 3e-035
Identities = 74/75 (98%)
Frame = -3
Query: 225 DLSGSPIKHKPTMLIVDDNEEMLNFLSSSLADKYSILTAEDGIEALNKLKENEVTLIVSD 46
DLSGSPIKHKPTMLIVDDNEEMLNFLSSSL DKYSILTAEDGIEALNKLKENEVTLIVSD
Sbjct: 1067 DLSGSPIKHKPTMLIVDDNEEMLNFLSSSLTDKYSILTAEDGIEALNKLKENEVTLIVSD 1126
Query: 45 WMMPRMDGVEFCKAI 1
WMMPRMDGVEFCKAI
Sbjct: 1127 WMMPRMDGVEFCKAI 1141
>gi|189464175|ref|ZP_03012960.1| hypothetical protein BACINT_00512 [Bacteroides
intestinalis DSM 17393]
Length = 1324
Score = 120 bits (299), Expect = 5e-026
Identities = 58/68 (85%), Positives = 64/68 (94%)
Frame = -3
Query: 204 KHKPTMLIVDDNEEMLNFLSSSLADKYSILTAEDGIEALNKLKENEVTLIVSDWMMPRMD 25
K+KP MLIVDDNEEMLNFLSSS + +YSILTAEDG+EAL KLKE+EVTLIVSDWMMPRMD
Sbjct: 1072 KNKPLMLIVDDNEEMLNFLSSSFSAQYSILTAEDGMEALEKLKEHEVTLIVSDWMMPRMD 1131
Query: 24 GVEFCKAI 1
GVEFCKA+
Sbjct: 1132 GVEFCKAL 1139
>gi|198274384|ref|ZP_03206916.1| hypothetical protein BACPLE_00529 [Bacteroides
plebeius DSM 17135]
Length = 1322
Score = 100 bits (247), Expect = 5e-020
Identities = 46/75 (61%), Positives = 58/75 (77%)
Frame = -3
Query: 225 DLSGSPIKHKPTMLIVDDNEEMLNFLSSSLADKYSILTAEDGIEALNKLKENEVTLIVSD 46
D + + K P MLIVDDNE+MLNFLSS Y+I+TA DG++ALNKLKE EV LI+SD
Sbjct: 1059 DTAATSQKVLPIMLIVDDNEDMLNFLSSHFQTSYTIVTAVDGVDALNKLKEQEVALIISD 1118
Query: 45 WMMPRMDGVEFCKAI 1
WMMP M+G++ CKA+
Sbjct: 1119 WMMPNMNGIDLCKAV 1133
>gi|29348332|ref|NP_811835.1| two-component system sensor histidine
kinase/response regulator, hybrid ('one-component system') [Bacteroides
thetaiotaomicron VPI-5482]
Length = 1338
Score = 82 bits (202), Expect = 8e-015
Identities = 37/72 (51%), Positives = 51/72 (70%)
Frame = -3
Query: 216 GSPIKHKPTMLIVDDNEEMLNFLSSSLADKYSILTAEDGIEALNKLKENEVTLIVSDWMM 37
G ++P +L+ DDN++ML+F+ L D Y +LTA+DG+EAL L EVTL+VSD +M
Sbjct: 1085 GESKTNRPVILVADDNQDMLSFVVRQLEDNYIVLTAKDGLEALEVLDNQEVTLVVSDVVM 1144
Query: 36 PRMDGVEFCKAI 1
PRMDG E CK +
Sbjct: 1145 PRMDGFELCKVV 1156
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,315,251,492
Number of Sequences: 7387702
Number of Extensions: 49315251492
Number of Successful Extensions: 26911051
Number of sequences better than 0.0: 0
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