BLASTX 7.6.2
Query= RU41817 /QuerySize=252
(251 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|57098919|ref|XP_540285.1| PREDICTED: similar to H3 histone, f... 91 2e-017
gi|170049060|ref|XP_001870860.1| histone H3.2 [Culex quinquefasc... 91 3e-017
gi|17567723|ref|NP_509344.1| HIStone family member (his-71) [Cae... 89 8e-017
gi|1076583|pir||S51664 histone H3.3 - tomato (fragment) 89 8e-017
gi|17556046|ref|NP_499608.1| HIStone family member (his-72) [Cae... 89 8e-017
>gi|57098919|ref|XP_540285.1| PREDICTED: similar to H3 histone, family 2 isoform
2 [Canis familiaris]
Length = 174
Score = 91 bits (224), Expect = 2e-017
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +2
Query: 59 RFRRRRGAMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR 211
R+ R AMARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYR
Sbjct: 31 RYSPSRFAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYR 81
>gi|170049060|ref|XP_001870860.1| histone H3.2 [Culex quinquefasciatus]
Length = 145
Score = 91 bits (223), Expect = 3e-017
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 68 RRRGAMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR 211
RR MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYR
Sbjct: 5 RRETTMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYR 52
>gi|17567723|ref|NP_509344.1| HIStone family member (his-71) [Caenorhabditis
elegans]
Length = 136
Score = 89 bits (219), Expect = 8e-017
Identities = 43/43 (100%)
Frame = +2
Query: 83 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR 211
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR 43
>gi|1076583|pir||S51664 histone H3.3 - tomato (fragment)
Length = 60
Score = 89 bits (219), Expect = 8e-017
Identities = 43/43 (100%)
Frame = +2
Query: 83 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR 211
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR 43
>gi|17556046|ref|NP_499608.1| HIStone family member (his-72) [Caenorhabditis
elegans]
Length = 136
Score = 89 bits (219), Expect = 8e-017
Identities = 43/43 (100%)
Frame = +2
Query: 83 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR 211
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR 43
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,734,349,300
Number of Sequences: 7387702
Number of Extensions: 86734349300
Number of Successful Extensions: 36856267
Number of sequences better than 0.0: 0
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