BLASTX 7.6.2
Query= RU42002 /QuerySize=231
(230 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|125541012|gb|EAY87407.1| hypothetical protein OsI_008640 [Ory... 61 2e-008
gi|115448485|ref|NP_001048022.1| Os02g0731700 [Oryza sativa (jap... 61 3e-008
gi|46390476|dbj|BAD15937.1| zinc finger protein-like [Oryza sati... 61 3e-008
gi|53793155|dbj|BAD54363.1| zinc finger protein-like [Oryza sati... 58 2e-007
gi|18409053|ref|NP_564932.1| zinc finger (B-box type) family pro... 57 5e-007
>gi|125541012|gb|EAY87407.1| hypothetical protein OsI_008640 [Oryza sativa
(indica cultivar-group)]
Length = 453
Score = 61 bits (147), Expect = 2e-008
Identities = 39/78 (50%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Frame = +2
Query: 2 GVKPELNPDDGWPDCMGLWDTDQIMNLQGYGDGSAAGCRMGMRGDNEQR--PGREARVSR 175
G P DD WP+ D + + G G G G +GM + PGREARV+R
Sbjct: 353 GRPPHGQLDDFWPN-----DHHYSVRVVGAG-GGGHGAEVGMMTVRPRMDGPGREARVTR 406
Query: 176 YREKRRTRLFSKKIRYEV 229
YREKRRTRLFSKKIRYEV
Sbjct: 407 YREKRRTRLFSKKIRYEV 424
>gi|115448485|ref|NP_001048022.1| Os02g0731700 [Oryza sativa (japonica
cultivar-group)]
Length = 323
Score = 61 bits (146), Expect = 3e-008
Identities = 41/79 (51%), Positives = 45/79 (56%), Gaps = 11/79 (13%)
Frame = +2
Query: 2 GVKPELNPDDGWPD---CMGLWDTDQIMNLQGYGDGSAAGCRMGMRGDNEQRPGREARVS 172
G P DD WP+ GLW G G G+ G M +R PGREARV+
Sbjct: 224 GRPPHGQLDDFWPNDHHYSGLWAAG------GGGHGAEVG-MMTVR-PRMDGPGREARVT 275
Query: 173 RYREKRRTRLFSKKIRYEV 229
RYREKRRTRLFSKKIRYEV
Sbjct: 276 RYREKRRTRLFSKKIRYEV 294
>gi|46390476|dbj|BAD15937.1| zinc finger protein-like [Oryza sativa Japonica
Group]
Length = 452
Score = 61 bits (146), Expect = 3e-008
Identities = 41/79 (51%), Positives = 45/79 (56%), Gaps = 11/79 (13%)
Frame = +2
Query: 2 GVKPELNPDDGWPD---CMGLWDTDQIMNLQGYGDGSAAGCRMGMRGDNEQRPGREARVS 172
G P DD WP+ GLW G G G+ G M +R PGREARV+
Sbjct: 353 GRPPHGQLDDFWPNDHHYSGLWAAG------GGGHGAEVG-MMTVR-PRMDGPGREARVT 404
Query: 173 RYREKRRTRLFSKKIRYEV 229
RYREKRRTRLFSKKIRYEV
Sbjct: 405 RYREKRRTRLFSKKIRYEV 423
>gi|53793155|dbj|BAD54363.1| zinc finger protein-like [Oryza sativa Japonica
Group]
Length = 481
Score = 58 bits (138), Expect = 2e-007
Identities = 32/46 (69%), Positives = 34/46 (73%), Gaps = 6/46 (13%)
Frame = +2
Query: 92 GDGSAAGCRMGMRGDNEQRPGREARVSRYREKRRTRLFSKKIRYEV 229
G+ A R+GM G GREARVSRYREKRRTRLFSKKIRYEV
Sbjct: 409 GEEQALTPRLGMDG------GREARVSRYREKRRTRLFSKKIRYEV 448
>gi|18409053|ref|NP_564932.1| zinc finger (B-box type) family protein
[Arabidopsis thaliana]
Length = 406
Score = 57 bits (135), Expect = 5e-007
Identities = 30/40 (75%), Positives = 31/40 (77%), Gaps = 4/40 (10%)
Frame = +2
Query: 110 GCRMGMRGDNEQRPGREARVSRYREKRRTRLFSKKIRYEV 229
G +G GD GREARVSRYREKRRTRLFSKKIRYEV
Sbjct: 346 GLHLGDAGDG----GREARVSRYREKRRTRLFSKKIRYEV 381
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,734,349,300
Number of Sequences: 7387702
Number of Extensions: 86734349300
Number of Successful Extensions: 36856267
Number of sequences better than 0.0: 0
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