BLASTX 7.6.2
Query= RU42475 /QuerySize=271
(270 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157352214|emb|CAO43242.1| unnamed protein product [Vitis vini... 117 3e-025
gi|5730136|emb|CAB52470.1| putative protein [Arabidopsis thaliana] 104 2e-021
gi|18417560|ref|NP_567843.1| integral membrane Yip1 family prote... 102 1e-020
gi|18398861|ref|NP_565442.1| integral membrane Yip1 family prote... 100 5e-020
gi|110740688|dbj|BAE98446.1| hypothetical protein [Arabidopsis t... 100 5e-020
>gi|157352214|emb|CAO43242.1| unnamed protein product [Vitis vinifera]
Length = 282
Score = 117 bits (292), Expect = 3e-025
Identities = 57/68 (83%), Positives = 62/68 (91%), Gaps = 3/68 (4%)
Frame = +3
Query: 48 SDTVPLHPSSQSDIDEIENLINASVQSGPTTVLPAKPPSPPRASIPVSSSPFIQSNLPQP 227
SDT+PLHPSSQSDIDEIENLINASVQSGP TVLPA+PPSPPRASIPVSS+PFIQSN+P
Sbjct: 4 SDTIPLHPSSQSDIDEIENLINASVQSGPATVLPARPPSPPRASIPVSSTPFIQSNIP-- 61
Query: 228 APPASSKP 251
PP +KP
Sbjct: 62 -PPTYNKP 68
>gi|5730136|emb|CAB52470.1| putative protein [Arabidopsis thaliana]
Length = 355
Score = 104 bits (259), Expect = 2e-021
Identities = 54/74 (72%), Positives = 62/74 (83%), Gaps = 5/74 (6%)
Frame = +3
Query: 24 KMSHSYGESDTVPLHPSSQSDIDEIENLINASVQSGPTTVLPAKPPSPPRASIPVSSSPF 203
KMSH +DT+PL+ SSQSDIDEIEN++N S QSGP TVLPA+PPSP R SIPVSSSPF
Sbjct: 75 KMSH----NDTIPLYQSSQSDIDEIENMMNDSFQSGPGTVLPARPPSPIRPSIPVSSSPF 130
Query: 204 IQSNLPQPAPPASS 245
+QSNLP P PP+SS
Sbjct: 131 VQSNLP-PLPPSSS 143
>gi|18417560|ref|NP_567843.1| integral membrane Yip1 family protein [Arabidopsis
thaliana]
Length = 280
Score = 102 bits (252), Expect = 1e-020
Identities = 50/66 (75%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 48 SDTVPLHPSSQSDIDEIENLINASVQSGPTTVLPAKPPSPPRASIPVSSSPFIQSNLPQP 227
+DT+PL+ SSQSDIDEIEN++N S QSGP TVLPA+PPSP R SIPVSSSPF+QSNLP P
Sbjct: 4 NDTIPLYQSSQSDIDEIENMMNDSFQSGPGTVLPARPPSPIRPSIPVSSSPFVQSNLP-P 62
Query: 228 APPASS 245
PP+SS
Sbjct: 63 LPPSSS 68
>gi|18398861|ref|NP_565442.1| integral membrane Yip1 family protein [Arabidopsis
thaliana]
Length = 281
Score = 100 bits (247), Expect = 5e-020
Identities = 54/71 (76%), Positives = 58/71 (81%), Gaps = 5/71 (7%)
Frame = +3
Query: 45 ESDTVPLHPSSQSDIDEIENLINASVQSGPTTVLPAKPPSPPRASIPV----SSSPFIQS 212
+ DTVPLHPSSQSDIDEIENLIN SVQSGP TVL A+PPSP R SIPV SSSPF+QS
Sbjct: 3 QGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFMQS 62
Query: 213 NLPQPAPPASS 245
NLP P P+SS
Sbjct: 63 NLP-PLHPSSS 72
>gi|110740688|dbj|BAE98446.1| hypothetical protein [Arabidopsis thaliana]
Length = 240
Score = 100 bits (247), Expect = 5e-020
Identities = 54/71 (76%), Positives = 58/71 (81%), Gaps = 5/71 (7%)
Frame = +3
Query: 45 ESDTVPLHPSSQSDIDEIENLINASVQSGPTTVLPAKPPSPPRASIPV----SSSPFIQS 212
+ DTVPLHPSSQSDIDEIENLIN SVQSGP TVL A+PPSP R SIPV SSSPF+QS
Sbjct: 3 QGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFMQS 62
Query: 213 NLPQPAPPASS 245
NLP P P+SS
Sbjct: 63 NLP-PLHPSSS 72
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,734,349,300
Number of Sequences: 7387702
Number of Extensions: 86734349300
Number of Successful Extensions: 36856267
Number of sequences better than 0.0: 0
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