BLASTX 7.6.2
Query= RU43384 /QuerySize=357
(356 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118482905|gb|ABK93366.1| unknown [Populus trichocarpa] 84 2e-015
gi|50548419|ref|XP_501679.1| YALI0C10450p [Yarrowia lipolytica] 63 4e-009
>gi|118482905|gb|ABK93366.1| unknown [Populus trichocarpa]
Length = 201
Score = 84 bits (207), Expect = 2e-015
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Frame = +1
Query: 154 STTNFDNLMLQTLMGRLQIRPPTTANNNSFLSQTLEDLLFDAANLSADDDDDENKTQLAK 333
S TNFDNL+LQTLMGRLQI P FLSQ+LEDLLF+ + S +DDDD NKTQL+K
Sbjct: 3 SFTNFDNLLLQTLMGRLQIHTPPP--QYPFLSQSLEDLLFNVDDSSDEDDDDTNKTQLSK 60
Query: 334 EESKLER 354
EESKLE+
Sbjct: 61 EESKLEK 67
>gi|50548419|ref|XP_501679.1| YALI0C10450p [Yarrowia lipolytica]
Length = 713
Score = 63 bits (152), Expect = 4e-009
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Frame = +2
Query: 20 QAPLSSQNPPKPQKPFSLVGDVLKRPKTPD*NSKT----QNSRS*APSAAPPTSTISCSK 187
+ P+SS P P P P +S T + S P PPT++ S
Sbjct: 436 EEPVSSSEGPTSSPP----------PPPPTTSSSTPPPPSTTSSSTPPPPPPTTSSSAPP 485
Query: 188 PSWVASKSDPQPPPTTTPSSPKPSKTSSSTPPTSPPTTTTTRTRP 322
P S S P PPPTT+ + P P T+SSTPP PPTT++T P
Sbjct: 486 PPPTTSSSAPPPPPTTSSTPPPPPPTTSSTPPPPPPTTSSTPPPP 530
Score = 63 bits (152), Expect = 4e-009
Identities = 42/111 (37%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Frame = +2
Query: 20 QAPLSSQNPPKPQKPFSL-VGDVLKRPKTPD*NSKTQNSRS*APSAAPPTSTISCSKPSW 196
+ P SS PP P S TP T +S + P PPT++ S P
Sbjct: 443 EGPTSSPPPPPPTTSSSTPPPPSTTSSSTPPPPPPTTSSSAPPP---PPTTSSSAPPPPP 499
Query: 197 VASKSDPQPPPTTTPSSPKPSKTSSSTPPTSPPTTTTTRTRPSSPRRSPSS 349
S + P PPPTT+ + P P T+SSTPP PPTT+T T P P S +S
Sbjct: 500 TTSSTPPPPPPTTSSTPPPPPPTTSSTPPPPPPTTST--TPPPPPTTSSTS 548
Score = 59 bits (140), Expect = 1e-007
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Frame = +2
Query: 65 FSLVGDVLKRPKTPD*NSKTQNSRS*APSAAPP-----TSTISCSKPSWVASKSDPQPPP 229
F+ G V +S+ S S P+++PP TS+ + PS +S + P PPP
Sbjct: 418 FAAAGQVENLENVESSSSEEPVSSSEGPTSSPPPPPPTTSSSTPPPPSTTSSSTPPPPPP 477
Query: 230 TTTPSSPKPSKTSSSTPPTSPPTTTTTRTRP 322
TT+ S+P P T+SS+ P PPTT++T P
Sbjct: 478 TTSSSAPPPPPTTSSSAPPPPPTTSSTPPPP 508
Score = 55 bits (130), Expect = 2e-006
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Frame = +2
Query: 32 SSQNPPKPQKPFSLVGDVLKRPKTPD*NSKTQNSRS*APSAA---PPTSTISCSKPSWVA 202
SS PP P S P P +S S+A PPT++ + P
Sbjct: 457 SSSTPPPP----STTSSSTPPPPPPTTSSSAPPPPPTTSSSAPPPPPTTSSTPPPPPPTT 512
Query: 203 SKSDPQPPPTTTPSSPKPSKTSSSTPPTSPPTTTTTRTRPSSPRRSPSS 349
S + P PPPTT+ + P P T+S+TPP P T++T+ P S P S
Sbjct: 513 SSTPPPPPPTTSSTPPPPPPTTSTTPPPPPTTSSTSPPPPPSSTYVPPS 561
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,734,349,300
Number of Sequences: 7387702
Number of Extensions: 86734349300
Number of Successful Extensions: 36856267
Number of sequences better than 0.0: 0
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