BLASTX 7.6.2
Query= RU43538 /QuerySize=282
(281 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|3955021|emb|CAA09367.1| HB2 homeodomain protein [Populus trem... 136 8e-031
gi|40233087|gb|AAR83341.1| homeodomain protein HB2 [Populus tome... 136 8e-031
gi|157358573|emb|CAO66249.1| unnamed protein product [Vitis vini... 133 4e-030
gi|147865345|emb|CAN84082.1| hypothetical protein [Vitis vinifera] 130 4e-029
gi|15237035|ref|NP_195280.1| HB-4/WOX13 (WUSCHEL-RELATED HOMEOBO... 126 6e-028
>gi|3955021|emb|CAA09367.1| HB2 homeodomain protein [Populus tremula x Populus
tremuloides]
Length = 261
Score = 136 bits (340), Expect = 8e-031
Identities = 64/92 (69%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = -3
Query: 273 KVMTDDQVEQLRKQIAVYAVICEQLVDMHKAFTAQQDLSGMKMGSVYGD-LMASGGSKVT 97
KVMTD+Q+E LRKQIAVYA ICEQLV+MHK +AQQDL+G ++G++Y D LMASGG K+T
Sbjct: 56 KVMTDEQLETLRKQIAVYAAICEQLVEMHKTLSAQQDLAGGRLGNLYCDPLMASGGHKIT 115
Query: 96 ARQRWTPTSLQLEILERIYDEANGTPGKHRVK 1
ARQRWTPT +QL+ILERI+D+ NGTP K ++K
Sbjct: 116 ARQRWTPTPVQLQILERIFDQGNGTPSKQKIK 147
>gi|40233087|gb|AAR83341.1| homeodomain protein HB2 [Populus tomentosa]
Length = 257
Score = 136 bits (340), Expect = 8e-031
Identities = 64/92 (69%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = -3
Query: 273 KVMTDDQVEQLRKQIAVYAVICEQLVDMHKAFTAQQDLSGMKMGSVYGD-LMASGGSKVT 97
KVMTD+Q+E LRKQIAVYA ICEQLV+MHK +AQQDL+G ++G++Y D LMASGG K+T
Sbjct: 52 KVMTDEQLETLRKQIAVYAAICEQLVEMHKTLSAQQDLAGGRLGNLYCDPLMASGGHKIT 111
Query: 96 ARQRWTPTSLQLEILERIYDEANGTPGKHRVK 1
ARQRWTPT +QL+ILERI+D+ NGTP K ++K
Sbjct: 112 ARQRWTPTPVQLQILERIFDQGNGTPSKQKIK 143
>gi|157358573|emb|CAO66249.1| unnamed protein product [Vitis vinifera]
Length = 278
Score = 133 bits (334), Expect = 4e-030
Identities = 61/92 (66%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = -3
Query: 273 KVMTDDQVEQLRKQIAVYAVICEQLVDMHKAFTAQQDLSGMKMGSVYGD-LMASGGSKVT 97
KVMTD+Q+E LR+QI+VYA ICEQLV+MHKA T QQDL+GM++G++Y D LMAS G K++
Sbjct: 34 KVMTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMASAGHKIS 93
Query: 96 ARQRWTPTSLQLEILERIYDEANGTPGKHRVK 1
+RQRWTPT +QL+ILERI+D+ NGTP K ++K
Sbjct: 94 SRQRWTPTPVQLQILERIFDQGNGTPSKQKIK 125
>gi|147865345|emb|CAN84082.1| hypothetical protein [Vitis vinifera]
Length = 243
Score = 130 bits (325), Expect = 4e-029
Identities = 59/90 (65%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = -3
Query: 267 MTDDQVEQLRKQIAVYAVICEQLVDMHKAFTAQQDLSGMKMGSVYGD-LMASGGSKVTAR 91
MTD+Q+E LR+QI+VYA ICEQLV+MHKA T QQDL+GM++G++Y D LMAS G K+++R
Sbjct: 1 MTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMASAGHKISSR 60
Query: 90 QRWTPTSLQLEILERIYDEANGTPGKHRVK 1
QRWTPT +QL+ILERI+D+ NGTP K ++K
Sbjct: 61 QRWTPTPVQLQILERIFDQGNGTPSKQKIK 90
>gi|15237035|ref|NP_195280.1| HB-4/WOX13 (WUSCHEL-RELATED HOMEOBOX 13); DNA
binding / transcription factor [Arabidopsis thaliana]
Length = 268
Score = 126 bits (315), Expect = 6e-028
Identities = 59/92 (64%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Frame = -3
Query: 273 KVMTDDQVEQLRKQIAVYAVICEQLVDMHKAFTAQQDLSGMKMGSVYGD-LMASGGSKVT 97
KVMTD+Q E LRKQIA+Y ICE+LV+MHK TAQQDL+G +MG +Y D +M+S G K+T
Sbjct: 36 KVMTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLAGGRMGGLYADPMMSSLGHKMT 95
Query: 96 ARQRWTPTSLQLEILERIYDEANGTPGKHRVK 1
ARQRWTPT +QL+ILERI+D+ GTP K ++K
Sbjct: 96 ARQRWTPTPVQLQILERIFDQGTGTPSKQKIK 127
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,734,349,300
Number of Sequences: 7387702
Number of Extensions: 86734349300
Number of Successful Extensions: 36856267
Number of sequences better than 0.0: 0
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