BLASTX 7.6.2
Query= RU43829 /QuerySize=298
(297 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157351207|emb|CAO41394.1| unnamed protein product [Vitis vini... 82 1e-014
gi|115435302|ref|NP_001042409.1| Os01g0218100 [Oryza sativa (jap... 55 1e-006
gi|125569534|gb|EAZ11049.1| hypothetical protein OsJ_000874 [Ory... 55 1e-006
gi|15225658|ref|NP_181549.1| basic helix-loop-helix (bHLH) famil... 54 2e-006
>gi|157351207|emb|CAO41394.1| unnamed protein product [Vitis vinifera]
Length = 252
Score = 82 bits (200), Expect = 1e-014
Identities = 50/79 (63%), Positives = 55/79 (69%), Gaps = 14/79 (17%)
Frame = +1
Query: 82 VPW---PHVSPVSKPTQFQFSGRFPPSWSSTAEGIAEEDRA----ASASKSHSQAEKRRR 240
+PW PHVS FQF G PSWS E +A EDR+ A+ASKSHSQAEKRRR
Sbjct: 24 LPWLPPPHVS-----ASFQFHGF--PSWSLPVEKMATEDRSDERTATASKSHSQAEKRRR 76
Query: 241 DRINAQLATLRKLIPHSDK 297
DRINAQLATLRKLIP S+K
Sbjct: 77 DRINAQLATLRKLIPKSEK 95
>gi|115435302|ref|NP_001042409.1| Os01g0218100 [Oryza sativa (japonica
cultivar-group)]
Length = 267
Score = 55 bits (132), Expect = 1e-006
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +1
Query: 172 GIAEEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPHSDK 297
G E++AA A KSHS+AE+RRR+RINA LATLR ++P +DK
Sbjct: 68 GGGREEKAAMALKSHSEAERRRRERINAHLATLRTMVPCTDK 109
>gi|125569534|gb|EAZ11049.1| hypothetical protein OsJ_000874 [Oryza sativa
(japonica cultivar-group)]
Length = 108
Score = 55 bits (132), Expect = 1e-006
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +1
Query: 172 GIAEEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPHSDK 297
G E++AA A KSHS+AE+RRR+RINA LATLR ++P +DK
Sbjct: 9 GGGREEKAAMALKSHSEAERRRRERINAHLATLRTMVPCTDK 50
>gi|15225658|ref|NP_181549.1| basic helix-loop-helix (bHLH) family protein
[Arabidopsis thaliana]
Length = 254
Score = 54 bits (129), Expect = 2e-006
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Frame = +1
Query: 130 FSGRFPPSWSSTAEGIAEEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPHSDK 297
F G FP + + ++A S S+SH AEKRRRDRIN+ L LRKL+P+SDK
Sbjct: 44 FGGNFPAD-----DCVGGIEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDK 94
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,734,349,300
Number of Sequences: 7387702
Number of Extensions: 86734349300
Number of Successful Extensions: 36856267
Number of sequences better than 0.0: 0
|