BLASTX 7.6.2
Query= RU44105 /QuerySize=326
(325 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157329238|emb|CAO38704.1| unnamed protein product [Vitis vini... 112 6e-024
gi|18424977|ref|NP_569016.1| hydroxyproline-rich glycoprotein fa... 103 4e-021
gi|163889363|gb|ABY48133.1| hydroxyproline-rich glycoprotein [Me... 99 1e-019
gi|118489809|gb|ABK96704.1| unknown [Populus trichocarpa x Popul... 94 2e-018
gi|195636928|gb|ACG37932.1| unknown [Zea mays] 79 6e-014
>gi|157329238|emb|CAO38704.1| unnamed protein product [Vitis vinifera]
Length = 2142
Score = 112 bits (280), Expect = 6e-024
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = +3
Query: 123 MESQDLSPPHVDASRPSLGFPLGTALLLIIIFSLSGVFSCCYHWDKLRSLRRSFSENSTP 302
MES D SPPH D SRPSLGFPLGTALLLIIIFSLSG+FSCCYHWDKLRSLRRSFS++ P
Sbjct: 49 MESPDFSPPHSDPSRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLRSLRRSFSDDRDP 108
Query: 303 E 305
E
Sbjct: 109 E 109
>gi|18424977|ref|NP_569016.1| hydroxyproline-rich glycoprotein family protein
[Arabidopsis thaliana]
Length = 136
Score = 103 bits (256), Expect = 4e-021
Identities = 52/65 (80%), Positives = 56/65 (86%), Gaps = 3/65 (4%)
Frame = +3
Query: 129 SQDLSPPHVDASRPSLGFPLGTALLLIIIFSLSGVFSCCYHWDKLRSLRRSFSENSTPET 308
+QD SPPH+DASRPSLGFPLGTALLLIIIFSLSG+FSCCYHWDK RSLRRS + N P
Sbjct: 4 TQDFSPPHMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLA-NGRP-- 60
Query: 309 SDDIE 323
S DIE
Sbjct: 61 SADIE 65
>gi|163889363|gb|ABY48133.1| hydroxyproline-rich glycoprotein [Medicago
truncatula]
Length = 126
Score = 99 bits (244), Expect = 1e-019
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +3
Query: 123 MESQDLSPPHVDASRPSLGFPLGTALLLIIIFSLSGVFSCCYHWDKLRSLRRSFS 287
MES DLSPP +D SRPSLGFPLGTALLL+IIFSLSG+FSCCYHW+K RSL +S S
Sbjct: 1 MESPDLSPPQIDTSRPSLGFPLGTALLLLIIFSLSGIFSCCYHWEKFRSLHQSLS 55
>gi|118489809|gb|ABK96704.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 92
Score = 94 bits (233), Expect = 2e-018
Identities = 47/62 (75%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Frame = +3
Query: 123 MESQDLSPPHVDASRPSLGFPLGTALLLIIIFSLSGVFSCCYHWDKLRSL--RRSFSENS 296
M S+D SPP+VDASRPSLGFPLG ALLLI I SLSGVFSCCYHWDKLR RRS SE+
Sbjct: 1 MTSKDFSPPYVDASRPSLGFPLGAALLLISIVSLSGVFSCCYHWDKLREFCRRRSSSEHP 60
Query: 297 TP 302
P
Sbjct: 61 DP 62
>gi|195636928|gb|ACG37932.1| unknown [Zea mays]
Length = 153
Score = 79 bits (194), Expect = 6e-014
Identities = 37/52 (71%), Positives = 48/52 (92%), Gaps = 2/52 (3%)
Frame = +3
Query: 132 QDLSP-PHVD-ASRPSLGFPLGTALLLIIIFSLSGVFSCCYHWDKLRSLRRS 281
+DL+P P ++ +SRP+LGFPLGTALLL++IF+LSG+FSCCYHWDKLR+L RS
Sbjct: 7 EDLTPAPSMEHSSRPTLGFPLGTALLLLVIFALSGMFSCCYHWDKLRALLRS 58
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
|