BLASTX 7.6.2
Query= RU44303 /QuerySize=754
(753 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|24817256|emb|CAD56220.1| ribosomal protein RL5 [Cicer arietinum] 342 2e-092
gi|1173055|sp|P46287.1|RL11_MEDSA RecName: Full=60S ribosomal pr... 341 5e-092
gi|79595462|ref|NP_850376.2| RPL16A (ribosomal protein large sub... 337 5e-091
gi|118483608|gb|ABK93699.1| unknown [Populus trichocarpa] 337 5e-091
gi|192910756|gb|ACF06486.1| 60S ribosomal protein L11 [Elaeis gu... 337 5e-091
>gi|24817256|emb|CAD56220.1| ribosomal protein RL5 [Cicer arietinum]
Length = 181
Score = 342 bits (877), Expect = 2e-092
Identities = 170/174 (97%), Positives = 172/174 (98%)
Frame = +1
Query: 76 MASEKKLANPMREIKVQKLVPNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 255
MASEKKL+NPMREIKVQKLV NISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 256 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDP 435
IRRNEKIACYVTVRGDKAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 436 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVIL 597
STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVIL
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVIL 174
>gi|1173055|sp|P46287.1|RL11_MEDSA RecName: Full=60S ribosomal protein L11;
AltName: Full=L5
Length = 181
Score = 341 bits (873), Expect = 5e-092
Identities = 169/174 (97%), Positives = 172/174 (98%)
Frame = +1
Query: 76 MASEKKLANPMREIKVQKLVPNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 255
MASEKKL+NPMREIKVQKLV NISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 256 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDP 435
IRRNEKIACYVTVRGDKAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 436 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVIL 597
STGIYGMDF+VVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVIL
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVIL 174
>gi|79595462|ref|NP_850376.2| RPL16A (ribosomal protein large subunit 16A);
structural constituent of ribosome [Arabidopsis thaliana]
Length = 182
Score = 337 bits (864), Expect = 5e-091
Identities = 166/180 (92%), Positives = 174/180 (96%)
Frame = +1
Query: 76 MASEKKLANPMREIKVQKLVPNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 255
MASEKKL+NPMR+IKVQKLV NISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 256 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDP 435
IRRNEKIACYVTVRG+KAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 436 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILTSPKHL 615
STGIYGMDFYVVLERPGYRV RRRRCKARVGIQHRVTKDDAMKWFQVKYEGVIL +++
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
>gi|118483608|gb|ABK93699.1| unknown [Populus trichocarpa]
Length = 180
Score = 337 bits (864), Expect = 5e-091
Identities = 167/180 (92%), Positives = 173/180 (96%)
Frame = +1
Query: 76 MASEKKLANPMREIKVQKLVPNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 255
MASEKKL+NPMREIKVQKLV NISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 256 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDP 435
IRRNEKIACYVTVRGDKAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 436 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILTSPKHL 615
STGIYGMDFYVVLERPGYRVGRRRRCK+RVGI RVTKDDAMKWFQVKYEGVIL +++
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSRVGIHQRVTKDDAMKWFQVKYEGVILNKSQNI 180
>gi|192910756|gb|ACF06486.1| 60S ribosomal protein L11 [Elaeis guineensis]
Length = 182
Score = 337 bits (864), Expect = 5e-091
Identities = 166/174 (95%), Positives = 172/174 (98%)
Frame = +1
Query: 76 MASEKKLANPMREIKVQKLVPNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 255
MASEKK++NPMREIKVQKLV NISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKMSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 256 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDP 435
IRRNEKIACYVTVRG+KAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 436 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVIL 597
STGIYGMDFYVVLERPGYRVGRRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVIL
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 174
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
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