Blast details for RU44368 (GenBank)


BLASTX 7.6.2

Query= RU44368 /QuerySize=481
        (480 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|209967447|gb|ACJ02352.1| 60S ribosomal protein L39 [Vernicia ...    110   3e-023
gi|18417922|ref|NP_567886.1| 60S ribosomal protein L39 (RPL39C) ...    110   3e-023
gi|47497035|dbj|BAD19088.1| putative 60S ribosomal protein L39 [...    110   3e-023
gi|118484124|gb|ABK93945.1| unknown [Populus trichocarpa]              109   7e-023
gi|115449229|ref|NP_001048394.1| Os02g0797200 [Oryza sativa (jap...    106   4e-022

>gi|209967447|gb|ACJ02352.1| 60S ribosomal protein L39 [Vernicia fordii]

          Length = 51

 Score =  110 bits (274), Expect = 3e-023
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = +1

Query:  52 MPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 204
           MPSHKTF+IKKKL KKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct:   1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51

>gi|18417922|ref|NP_567886.1| 60S ribosomal protein L39 (RPL39C) [Arabidopsis
        thaliana]

          Length = 51

 Score =  110 bits (273), Expect = 3e-023
 Identities = 48/51 (94%), Positives = 51/51 (100%)
 Frame = +1

Query:  52 MPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 204
           MPSHK+F+IKKKLGKKMRQNRPIPHWIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct:   1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51

>gi|47497035|dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa
        Japonica Group]

          Length = 118

 Score =  110 bits (273), Expect = 3e-023
 Identities = 50/55 (90%), Positives = 51/55 (92%)
 Frame = +1

Query:  40 PRAKMPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 204
           P A MPSHKTF IKKKL KKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct:  64 PAATMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 118

>gi|118484124|gb|ABK93945.1| unknown [Populus trichocarpa]

          Length = 51

 Score =  109 bits (270), Expect = 7e-023
 Identities = 49/51 (96%)
 Frame = +1

Query:  52 MPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 204
           MPSHKTF IKKKL KKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct:   1 MPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51

>gi|115449229|ref|NP_001048394.1| Os02g0797200 [Oryza sativa (japonica
        cultivar-group)]

          Length = 51

 Score =  106 bits (264), Expect = 4e-022
 Identities = 48/51 (94%), Positives = 49/51 (96%)
 Frame = +1

Query:  52 MPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 204
           MPSHKTF IKKKL KKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct:   1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0