BLASTX 7.6.2
Query= RU44394 /QuerySize=484
(483 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15239774|ref|NP_197458.1| unknown protein [Arabidopsis thaliana] 179 6e-044
gi|115462481|ref|NP_001054840.1| Os05g0188300 [Oryza sativa (jap... 146 4e-034
gi|125551119|gb|EAY96828.1| hypothetical protein OsI_018061 [Ory... 142 8e-033
gi|195649273|gb|ACG44104.1| unknown [Zea mays] 138 9e-032
gi|168058411|ref|XP_001781202.1| predicted protein [Physcomitrel... 102 7e-021
>gi|15239774|ref|NP_197458.1| unknown protein [Arabidopsis thaliana]
Length = 137
Score = 179 bits (452), Expect = 6e-044
Identities = 88/136 (64%), Positives = 104/136 (76%), Gaps = 7/136 (5%)
Frame = +3
Query: 33 MVGDIEKMIAVGLVWGATNALMLRRALLWDEALKSSTSSSQPQPI-------TSLKKWLK 191
M D++KM+AVGLVWGATNAL+ R AL WD+ SST+ S P+ +L+ W+
Sbjct: 1 MKEDMDKMVAVGLVWGATNALIRRGALAWDKTKSSSTTESHSPPLQIRRKIMIALRDWIN 60
Query: 192 LLSIWQYTIPFSVNLSASATFFAILSHTPISLAVPVTNATTFAATAAFGILFGEQTHLGL 371
LL WQY+IPF +NLSASATFFA+LSH PISLAVPVTNATTFAATAAFGIL GE+T +GL
Sbjct: 61 LLLFWQYSIPFLINLSASATFFALLSHAPISLAVPVTNATTFAATAAFGILLGEETQIGL 120
Query: 372 ALFGTGLIVLGIWLCI 419
AL GT IV GIWLC+
Sbjct: 121 ALLGTSFIVFGIWLCV 136
>gi|115462481|ref|NP_001054840.1| Os05g0188300 [Oryza sativa (japonica
cultivar-group)]
Length = 131
Score = 146 bits (367), Expect = 4e-034
Identities = 77/131 (58%), Positives = 94/131 (71%), Gaps = 7/131 (5%)
Frame = +3
Query: 39 GDIEKMIAVGLVWGATNALMLRRALLWDEALKS--STSSSQPQPITS-LKKWLKLLSIWQ 209
GD M+AVGLVWG TNALM R AL+WD L+S +TSSS +T L++W +LL WQ
Sbjct: 5 GDAASMVAVGLVWGTTNALMRRGALVWDHRLRSLPATSSS----VTGVLRRWAELLLTWQ 60
Query: 210 YTIPFSVNLSASATFFAILSHTPISLAVPVTNATTFAATAAFGILFGEQTHLGLALFGTG 389
Y+ PF+VNL+ASA FF++L PIS+AVPVTNATTFAATA L GE T A GT
Sbjct: 61 YSAPFAVNLAASAAFFSLLGAAPISVAVPVTNATTFAATAVAAALLGEGTRAAPAALGTA 120
Query: 390 LIVLGIWLCIT 422
LIVLG+W+CI+
Sbjct: 121 LIVLGVWVCIS 131
>gi|125551119|gb|EAY96828.1| hypothetical protein OsI_018061 [Oryza sativa
(indica cultivar-group)]
Length = 301
Score = 142 bits (356), Expect = 8e-033
Identities = 76/128 (59%), Positives = 91/128 (71%), Gaps = 7/128 (5%)
Frame = +3
Query: 39 GDIEKMIAVGLVWGATNALMLRRALLWDEALKS--STSSSQPQPITS-LKKWLKLLSIWQ 209
GD M+AVGLVWG TNALM R AL+WD L+S +TSSS +T L++W +LL WQ
Sbjct: 5 GDAASMVAVGLVWGTTNALMRRGALVWDHRLRSLPATSSS----VTGVLRRWAELLLTWQ 60
Query: 210 YTIPFSVNLSASATFFAILSHTPISLAVPVTNATTFAATAAFGILFGEQTHLGLALFGTG 389
Y+ PF+VNL+ASA FF++L PIS+AVPVTNATTFAATA L GE T A GT
Sbjct: 61 YSAPFAVNLAASAAFFSLLGAAPISVAVPVTNATTFAATAVAAALLGEGTRAAPAALGTA 120
Query: 390 LIVLGIWL 413
LIVLG+WL
Sbjct: 121 LIVLGVWL 128
>gi|195649273|gb|ACG44104.1| unknown [Zea mays]
Length = 127
Score = 138 bits (347), Expect = 9e-032
Identities = 70/127 (55%), Positives = 87/127 (68%), Gaps = 6/127 (4%)
Frame = +3
Query: 42 DIEKMIAVGLVWGATNALMLRRALLWDEALKSSTSSSQPQPITSLKKWLKLLSIWQYTIP 221
D M+AVGLVWGATNALM R AL+WD ++ S + L++W +LL WQY+ P
Sbjct: 7 DAASMVAVGLVWGATNALMRRGALVWDRRARACPSGN------VLRRWAELLLTWQYSAP 60
Query: 222 FSVNLSASATFFAILSHTPISLAVPVTNATTFAATAAFGILFGEQTHLGLALFGTGLIVL 401
F+ NLSASA FFA+L PIS+AVPVTNA TFAATAA GE+ A+ GT LIVL
Sbjct: 61 FAANLSASAAFFALLGAAPISVAVPVTNAVTFAATAAAAAALGERVRPAPAVLGTTLIVL 120
Query: 402 GIWLCIT 422
G+W+CI+
Sbjct: 121 GVWVCIS 127
>gi|168058411|ref|XP_001781202.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 141
Score = 102 bits (253), Expect = 7e-021
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 6/129 (4%)
Frame = +3
Query: 54 MIAVGLVWGATNALMLRRALLWDEALKSSTSSSQPQPITS------LKKWLKLLSIWQYT 215
++A+G VWG TNAL+ R AL+ +E +++ + + W +LL +WQY+
Sbjct: 7 LLAIGTVWGITNALIKRGALIAEEVKRTAKQRTALKKNLGGVVGGFFLDWFRLLCVWQYS 66
Query: 216 IPFSVNLSASATFFAILSHTPISLAVPVTNATTFAATAAFGILFGEQTHLGLALFGTGLI 395
+PF +NLS S F L +PI+LAVPVTNATTFA TA G GE L + G LI
Sbjct: 67 VPFLLNLSMSVLFVIKLGDSPITLAVPVTNATTFAVTAVAGAALGENFRLVETIAGVLLI 126
Query: 396 VLGIWLCIT 422
V G+ LCI+
Sbjct: 127 VAGVTLCIS 135
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
|