BLASTX 7.6.2
Query= RU44444 /QuerySize=861
(860 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157344644|emb|CAO70027.1| unnamed protein product [Vitis vini... 278 6e-073
gi|147800021|emb|CAN65947.1| hypothetical protein [Vitis vinifera] 275 3e-072
gi|15231102|ref|NP_191425.1| 60S ribosomal protein-related [Arab... 267 1e-069
gi|15227974|ref|NP_181793.1| 60S ribosomal protein-related [Arab... 250 1e-064
gi|21805739|gb|AAM76766.1| hypothetical protein [Arabidopsis tha... 250 1e-064
>gi|157344644|emb|CAO70027.1| unnamed protein product [Vitis vinifera]
Length = 411
Score = 278 bits (709), Expect = 6e-073
Identities = 136/222 (61%), Positives = 173/222 (77%), Gaps = 3/222 (1%)
Frame = +3
Query: 126 SSTPTPTKVSPKTARNAVNALLKWRNSKSEAQKPDILSSDE--LLYLVVSLKKIPPKGRV 299
SS +P V+ +T A ALLKW+ SKS QKP +L+ DE +YL+++LKKIPPKGR
Sbjct: 16 SSMASPPAVAAETIEKATTALLKWQASKSNGQKPQLLNQDEDRFIYLILTLKKIPPKGRT 75
Query: 300 NAYKIPLPTPLHSQV-TEFCLIYDDRPKSKLTKAQIQAKIKADNLPVVKILKYTKLKSDY 476
N +KIPLP PLH+ +E CLI DDRP S LT + K+K++N+PV K+L +KLKS++
Sbjct: 76 NPHKIPLPHPLHTPPNSELCLIVDDRPNSHLTSQAAKTKVKSENIPVSKVLSLSKLKSNF 135
Query: 477 KAFESKRKLLNSYDVFLADKQIVPLLPRLIGKQFFKKKKIPVPVDLLHKNWKEQIDRICG 656
+ FE+KRKL +SYD FLADK+IVPLLP+L+GK FFKK+KIPV VDL HKNWKEQIDR CG
Sbjct: 136 RPFEAKRKLCDSYDFFLADKRIVPLLPKLLGKHFFKKRKIPVAVDLGHKNWKEQIDRACG 195
Query: 657 SALLFLSTGTCSVVRVARTSMREEEI.ENVVSAISGIVDIVP 782
SALL+L TGTCSVVRV + SM +E+I ENVV+AI G+V++VP
Sbjct: 196 SALLYLRTGTCSVVRVGKLSMEKEQIVENVVAAIDGVVELVP 237
>gi|147800021|emb|CAN65947.1| hypothetical protein [Vitis vinifera]
Length = 394
Score = 275 bits (703), Expect = 3e-072
Identities = 134/218 (61%), Positives = 171/218 (78%), Gaps = 3/218 (1%)
Frame = +3
Query: 138 TPTKVSPKTARNAVNALLKWRNSKSEAQKPDILSSDE--LLYLVVSLKKIPPKGRVNAYK 311
+P V+ +T A ALLKW+ SKS QKP +L+ DE +YL+++LKKIPPKGR N +K
Sbjct: 3 SPPAVAAETIEKATTALLKWQASKSNGQKPQLLNQDEDRFIYLILTLKKIPPKGRTNPHK 62
Query: 312 IPLPTPLHSQV-TEFCLIYDDRPKSKLTKAQIQAKIKADNLPVVKILKYTKLKSDYKAFE 488
IPLP PLH+ +E CLI DDRP S LT + K+K++N+PV K+L +KLKS+++ FE
Sbjct: 63 IPLPHPLHTPPNSELCLIVDDRPNSHLTSQAAKTKVKSENIPVSKVLSLSKLKSNFRPFE 122
Query: 489 SKRKLLNSYDVFLADKQIVPLLPRLIGKQFFKKKKIPVPVDLLHKNWKEQIDRICGSALL 668
+KRKL +SYD FLADK+IVPLLP+L+GK FFKK+KIPV VDL HKNWKEQIDR CGSALL
Sbjct: 123 AKRKLCDSYDFFLADKRIVPLLPKLLGKHFFKKRKIPVAVDLGHKNWKEQIDRACGSALL 182
Query: 669 FLSTGTCSVVRVARTSMREEEI.ENVVSAISGIVDIVP 782
+L TGTCSVVRV + SM +E+I ENVV+AI G+V++VP
Sbjct: 183 YLRTGTCSVVRVGKLSMEKEQIVENVVAAIDGVVELVP 220
>gi|15231102|ref|NP_191425.1| 60S ribosomal protein-related [Arabidopsis
thaliana]
Length = 446
Score = 267 bits (681), Expect = 1e-069
Identities = 123/219 (56%), Positives = 167/219 (76%), Gaps = 3/219 (1%)
Frame = +3
Query: 144 TKVSPKTARNAVNALLKWRNSKSEAQKPDILSSDELLYLVVSLKKIPPKGRVNAYKIPLP 323
++VSPKT +A+N L+ WR+ KS+ +KP +L DEL+YL V+LKKIP K R NAY+IPLP
Sbjct: 22 SRVSPKTVESALNGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKIPQKTRTNAYRIPLP 81
Query: 324 TPLHSQVT---EFCLIYDDRPKSKLTKAQIQAKIKADNLPVVKILKYTKLKSDYKAFESK 494
PL + E CLI DDRPKS LTK KIK++N+P+ K++K +KLKSDYKAFE+K
Sbjct: 82 HPLINPTVDSPEICLIIDDRPKSGLTKDDAMKKIKSENIPITKVIKLSKLKSDYKAFEAK 141
Query: 495 RKLLNSYDVFLADKQIVPLLPRLIGKQFFKKKKIPVPVDLLHKNWKEQIDRICGSALLFL 674
RKL +SYD+F D++I+PLLPR+IGK+FF KKIPV +DL H+NWK QI++ CGSA+ F+
Sbjct: 142 RKLCDSYDMFFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKACGSAMFFI 201
Query: 675 STGTCSVVRVARTSMREEEI.ENVVSAISGIVDIVP.NW 791
TGTCSV++V + SM EI ENV++ ++G+V+ +P W
Sbjct: 202 RTGTCSVIKVGKLSMDICEITENVMATLNGLVEFLPNKW 240
>gi|15227974|ref|NP_181793.1| 60S ribosomal protein-related [Arabidopsis
thaliana]
Length = 372
Score = 250 bits (638), Expect = 1e-064
Identities = 113/219 (51%), Positives = 163/219 (74%), Gaps = 3/219 (1%)
Frame = +3
Query: 144 TKVSPKTARNAVNALLKWRNSKSEAQKPDILSSDELLYLVVSLKKIPPKGRVNAYKIPLP 323
++VSPKT +AV AL+K N KS +KP +L D YLVV+LKKIP + NAY+IPLP
Sbjct: 2 SRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKIPQRNFTNAYRIPLP 61
Query: 324 TPLHSQV---TEFCLIYDDRPKSKLTKAQIQAKIKADNLPVVKILKYTKLKSDYKAFESK 494
PL + E CLI DDRP+S LT+ + IK++N+P+ K++K +KLKSDY +FESK
Sbjct: 62 HPLINTTEDSPELCLIIDDRPESGLTEEDAKKNIKSENIPITKVVKLSKLKSDYGSFESK 121
Query: 495 RKLLNSYDVFLADKQIVPLLPRLIGKQFFKKKKIPVPVDLLHKNWKEQIDRICGSALLFL 674
RKL +SYD+F +D++++P+LP+LIGK+FF+ KK PV +DL H NWKEQI++ CG+A+ F+
Sbjct: 122 RKLCDSYDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFFM 181
Query: 675 STGTCSVVRVARTSMREEEI.ENVVSAISGIVDIVP.NW 791
TG+CS ++VA+ SM ++I ENV + ++G+VD++P W
Sbjct: 182 RTGSCSAIKVAKLSMESDDIVENVTATLNGVVDVLPSRW 220
>gi|21805739|gb|AAM76766.1| hypothetical protein [Arabidopsis thaliana]
Length = 372
Score = 250 bits (638), Expect = 1e-064
Identities = 113/219 (51%), Positives = 163/219 (74%), Gaps = 3/219 (1%)
Frame = +3
Query: 144 TKVSPKTARNAVNALLKWRNSKSEAQKPDILSSDELLYLVVSLKKIPPKGRVNAYKIPLP 323
++VSPKT +AV AL+K N KS +KP +L D YLVV+LKKIP + NAY+IPLP
Sbjct: 2 SRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKIPQRNFTNAYRIPLP 61
Query: 324 TPLHSQV---TEFCLIYDDRPKSKLTKAQIQAKIKADNLPVVKILKYTKLKSDYKAFESK 494
PL + E CLI DDRP+S LT+ + IK++N+P+ K++K +KLKSDY +FESK
Sbjct: 62 HPLINTTEDSPELCLIIDDRPESGLTEEDAKKNIKSENIPITKVVKLSKLKSDYGSFESK 121
Query: 495 RKLLNSYDVFLADKQIVPLLPRLIGKQFFKKKKIPVPVDLLHKNWKEQIDRICGSALLFL 674
RKL +SYD+F +D++++P+LP+LIGK+FF+ KK PV +DL H NWKEQI++ CG+A+ F+
Sbjct: 122 RKLCDSYDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFFM 181
Query: 675 STGTCSVVRVARTSMREEEI.ENVVSAISGIVDIVP.NW 791
TG+CS ++VA+ SM ++I ENV + ++G+VD++P W
Sbjct: 182 RTGSCSAIKVAKLSMESDDIVENVTATLNGVVDVLPSRW 220
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
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