BLASTX 7.6.2
Query= RU44460 /QuerySize=555
(554 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|50812722|gb|AAT81473.1| dehydrin 13 [Hordeum vulgare subsp. v... 86 1e-015
gi|109484988|ref|XP_001056318.1| PREDICTED: hypothetical protein... 71 3e-011
gi|170057326|ref|XP_001864435.1| conserved hypothetical protein ... 69 2e-010
>gi|50812722|gb|AAT81473.1| dehydrin 13 [Hordeum vulgare subsp. vulgare]
Length = 107
Score = 86 bits (212), Expect = 1e-015
Identities = 53/107 (49%), Positives = 61/107 (57%), Gaps = 13/107 (12%)
Frame = +1
Query: 67 MAGIIHKIGDALPIGGEG----KDKEQHKEGEHHKKEGEHHKEGEHYKDDHKKHKDDHGD 234
MAGIIHKI + L +GG KD E K EH KK+GEH K+GEH + +K KD
Sbjct: 1 MAGIIHKIEEKLHMGGSSDEHKKDDEHKKAEEHKKKDGEHKKDGEHKEGMMEKIKDKISG 60
Query: 235 DHHKSKGHDEHHKDDKEK--KKKNKDKKKEDGH-------SSSSDSD 348
D H D HK+ KEK KKK KDKK +GH SSSSDSD
Sbjct: 61 DGHGDGKKDGDHKEKKEKKDKKKKKDKKDGEGHKDDDGHSSSSSDSD 107
>gi|109484988|ref|XP_001056318.1| PREDICTED: hypothetical protein [Rattus
norvegicus]
Length = 152
Score = 71 bits (173), Expect = 3e-011
Identities = 37/77 (48%), Positives = 62/77 (80%)
Frame = -3
Query: 354 LLIAVAAAAVAVLLLLVLVLLLLLFVVLVVLVVALALVVIVAVVVLVFFVVILVVLALLV 175
+++ + V VL+L+++VL+L+L +VLV+L+V L LVV+V ++VLV V++LVVL L++
Sbjct: 34 VVLVLVVLVVLVLVLVLMVLVLVLVLVLVLLLVVLVLVVLVLMLVLVLVVLVLVVLVLVL 93
Query: 174 VLALLLVVLALLVLLLV 124
VL L+++VL +LVL+LV
Sbjct: 94 VLVLVVLVLVVLVLVLV 110
Score = 71 bits (173), Expect = 3e-011
Identities = 43/94 (45%), Positives = 67/94 (71%), Gaps = 4/94 (4%)
Frame = -3
Query: 393 MMKMKKWKSIRQTLLIAVAAAAVAVLLLLVLVLLLLLFVVLVVLVVALALVVIVAVVVLV 214
M M+K + +L+ + V ++L+LVLVL++L+ VVLVVLV+ L L+V+V V+VLV
Sbjct: 1 MTVMEKLWLVLVLVLVVLVLVLVVLVLVLVLVLVVLVLVVLVVLVLVLVLMVLVLVLVLV 60
Query: 213 ----FFVVILVVLALLVVLALLLVVLALLVLLLV 124
V++LVVL L++VL L+++VL +LVL+LV
Sbjct: 61 LVLLLVVLVLVVLVLMLVLVLVVLVLVVLVLVLV 94
>gi|170057326|ref|XP_001864435.1| conserved hypothetical protein [Culex
quinquefasciatus]
Length = 356
Score = 69 bits (167), Expect = 2e-010
Identities = 35/81 (43%), Positives = 64/81 (79%)
Frame = -3
Query: 366 IRQTLLIAVAAAAVAVLLLLVLVLLLLLFVVLVVLVVALALVVIVAVVVLVFFVVILVVL 187
+R +L+ V + ++L+LVLVL+L+L +VLV+++V + ++V+V V+VLV +V+++VL
Sbjct: 160 VRNLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLILVLVLVLVLVLVLVLVLVLVLVLVL 219
Query: 186 ALLVVLALLLVVLALLVLLLV 124
L++VL L+LV++ +LVL+LV
Sbjct: 220 VLVLVLVLVLVLVLVLVLVLV 240
Score = 68 bits (165), Expect = 3e-010
Identities = 35/81 (43%), Positives = 63/81 (77%)
Frame = -3
Query: 354 LLIAVAAAAVAVLLLLVLVLLLLLFVVLVVLVVALALVVIVAVVVLVFFVVILVVLALLV 175
+L+ V + ++L+LVLVL+L+L +VLV+++V + ++V+V V+VLV +V+++VL L++
Sbjct: 184 VLVLVLVLVLILVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVL 243
Query: 174 VLALLLVVLALLVLLLVFAFP 112
VL L+LV++ +LVL+LV P
Sbjct: 244 VLVLVLVLVLVLVLVLVLVLP 264
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
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