BLASTX 7.6.2
Query= RU44469 /QuerySize=422
(421 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|1173055|sp|P46287.1|RL11_MEDSA RecName: Full=60S ribosomal pr... 218 7e-056
gi|24817256|emb|CAD56220.1| ribosomal protein RL5 [Cicer arietinum] 218 7e-056
gi|118483608|gb|ABK93699.1| unknown [Populus trichocarpa] 218 7e-056
gi|118482573|gb|ABK93207.1| unknown [Populus trichocarpa] 216 4e-055
gi|192910756|gb|ACF06486.1| 60S ribosomal protein L11 [Elaeis gu... 216 4e-055
>gi|1173055|sp|P46287.1|RL11_MEDSA RecName: Full=60S ribosomal protein L11;
AltName: Full=L5
Length = 181
Score = 218 bits (555), Expect = 7e-056
Identities = 110/114 (96%), Positives = 113/114 (99%)
Frame = +3
Query: 78 MASEKKLAHPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 257
MASEKKL++PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 258 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDL 419
IRRNEKIACYVTVRGDKAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDL
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL 114
>gi|24817256|emb|CAD56220.1| ribosomal protein RL5 [Cicer arietinum]
Length = 181
Score = 218 bits (555), Expect = 7e-056
Identities = 110/114 (96%), Positives = 113/114 (99%)
Frame = +3
Query: 78 MASEKKLAHPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 257
MASEKKL++PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 258 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDL 419
IRRNEKIACYVTVRGDKAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDL
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL 114
>gi|118483608|gb|ABK93699.1| unknown [Populus trichocarpa]
Length = 180
Score = 218 bits (555), Expect = 7e-056
Identities = 110/114 (96%), Positives = 113/114 (99%)
Frame = +3
Query: 78 MASEKKLAHPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 257
MASEKKL++PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 258 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDL 419
IRRNEKIACYVTVRGDKAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDL
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL 114
>gi|118482573|gb|ABK93207.1| unknown [Populus trichocarpa]
Length = 180
Score = 216 bits (549), Expect = 4e-055
Identities = 109/114 (95%), Positives = 112/114 (98%)
Frame = +3
Query: 78 MASEKKLAHPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 257
MASEKKL++PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 258 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDL 419
IRRNEKIACYVTVRGDKAM L ESGLKVKEYELLR+NFSDTGCFGFGIQEHIDL
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLQESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL 114
>gi|192910756|gb|ACF06486.1| 60S ribosomal protein L11 [Elaeis guineensis]
Length = 182
Score = 216 bits (549), Expect = 4e-055
Identities = 108/114 (94%), Positives = 113/114 (99%)
Frame = +3
Query: 78 MASEKKLAHPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 257
MASEKK+++PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKMSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 258 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDL 419
IRRNEKIACYVTVRG+KAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDL
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL 114
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
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