BLASTX 7.6.2
Query= RU44524 /QuerySize=406
(405 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|115441259|ref|NP_001044909.1| Os01g0866700 [Oryza sativa (jap... 179 7e-044
gi|194699902|gb|ACF84035.1| unknown [Zea mays] 178 9e-044
gi|168005030|ref|XP_001755214.1| predicted protein [Physcomitrel... 177 2e-043
gi|15218164|ref|NP_173542.1| small nuclear ribonucleoprotein, pu... 172 8e-042
gi|15223768|ref|NP_177812.1| small nuclear ribonucleoprotein, pu... 170 2e-041
>gi|115441259|ref|NP_001044909.1| Os01g0866700 [Oryza sativa (japonica
cultivar-group)]
Length = 104
Score = 179 bits (452), Expect = 7e-044
Identities = 88/96 (91%), Positives = 94/96 (97%)
Frame = +3
Query: 78 ASEEDFPVKEPLDMIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTSVEI 257
A+EE+ VKEPLD+IRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVT+VEI
Sbjct: 9 AAEEEIAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEI 68
Query: 258 DDETYEEIVRTTKRTVPYLFVRGDGVILVSPPLRTA 365
DDETYEEIVRTTKRT+P+LFVRGDGVILVSPPLRTA
Sbjct: 69 DDETYEEIVRTTKRTIPFLFVRGDGVILVSPPLRTA 104
>gi|194699902|gb|ACF84035.1| unknown [Zea mays]
Length = 98
Score = 178 bits (451), Expect = 9e-044
Identities = 87/96 (90%), Positives = 94/96 (97%)
Frame = +3
Query: 78 ASEEDFPVKEPLDMIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTSVEI 257
A+EE+ VKEPLD+IRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE+VT+VEI
Sbjct: 3 AAEEEIAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEI 62
Query: 258 DDETYEEIVRTTKRTVPYLFVRGDGVILVSPPLRTA 365
DDETYEEIVRTTKRT+P+LFVRGDGVILVSPPLRTA
Sbjct: 63 DDETYEEIVRTTKRTIPFLFVRGDGVILVSPPLRTA 98
>gi|168005030|ref|XP_001755214.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 97
Score = 177 bits (448), Expect = 2e-043
Identities = 87/97 (89%), Positives = 94/97 (96%)
Frame = +3
Query: 75 MASEEDFPVKEPLDMIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTSVE 254
MA+EED VKEPLD+IRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILG+VEE+ TSVE
Sbjct: 1 MATEEDSAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGEVEEVTTSVE 60
Query: 255 IDDETYEEIVRTTKRTVPYLFVRGDGVILVSPPLRTA 365
IDDETYEEIVRT++RTVPYLFVRGDGVILVSPPLRT+
Sbjct: 61 IDDETYEEIVRTSRRTVPYLFVRGDGVILVSPPLRTS 97
>gi|15218164|ref|NP_173542.1| small nuclear ribonucleoprotein, putative / snRNP,
putative / Sm protein, putative [Arabidopsis thaliana]
Length = 97
Score = 172 bits (434), Expect = 8e-042
Identities = 82/96 (85%), Positives = 93/96 (96%)
Frame = +3
Query: 75 MASEEDFPVKEPLDMIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTSVE 254
M+ EED V+EPLD+IRLS++ERIYVKLRSDRELRGKLHA+DQHLNMILGDVEE++T++E
Sbjct: 1 MSVEEDATVREPLDLIRLSIEERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTIE 60
Query: 255 IDDETYEEIVRTTKRTVPYLFVRGDGVILVSPPLRT 362
IDDETYEEIVRTTKRTVP+LFVRGDGVILVSPPLRT
Sbjct: 61 IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRT 96
>gi|15223768|ref|NP_177812.1| small nuclear ribonucleoprotein, putative / snRNP,
putative / Sm protein, putative [Arabidopsis thaliana]
Length = 98
Score = 170 bits (430), Expect = 2e-041
Identities = 83/97 (85%), Positives = 92/97 (94%)
Frame = +3
Query: 75 MASEEDFPVKEPLDMIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTSVE 254
M+ EE+ V+EPLD+IRLSLDERIYVKLRSDRELRGKLHA+DQHLNMILGDVEE +T+VE
Sbjct: 1 MSGEEEATVREPLDLIRLSLDERIYVKLRSDRELRGKLHAFDQHLNMILGDVEETITTVE 60
Query: 255 IDDETYEEIVRTTKRTVPYLFVRGDGVILVSPPLRTA 365
IDDETYEEIVRTTKRT+ +LFVRGDGVILVSPPLRTA
Sbjct: 61 IDDETYEEIVRTTKRTIEFLFVRGDGVILVSPPLRTA 97
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
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