BLASTX 7.6.2
Query= RU44650 /QuerySize=764
(763 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118483462|gb|ABK93630.1| unknown [Populus trichocarpa] 227 7e-058
gi|147815109|emb|CAN61363.1| hypothetical protein [Vitis vinifera] 211 6e-053
gi|116785888|gb|ABK23898.1| unknown [Picea sitchensis] 187 9e-046
gi|157382898|gb|ABV48884.1| high mobility group protein B2 [Phys... 121 6e-026
gi|168028752|ref|XP_001766891.1| predicted protein [Physcomitrel... 120 2e-025
>gi|118483462|gb|ABK93630.1| unknown [Populus trichocarpa]
Length = 201
Score = 227 bits (578), Expect = 7e-058
Identities = 121/200 (60%), Positives = 144/200 (72%), Gaps = 6/200 (3%)
Frame = +3
Query: 96 SRKRVEATAED-----SAGPSLLRGKDGSAFARCDGCQKNVPVALISFHNCSLDAKIKTN 260
+RKRVEA + D + SL+R KDGSAF +C+ C+K+VPVALISFH+CSLDAKIK N
Sbjct: 2 ARKRVEAESTDGSVDANTTTSLVRAKDGSAFTKCEECKKDVPVALISFHSCSLDAKIKMN 61
Query: 261 LEAQVVEKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFR 440
LEAQVVEKP+E K+ P ERKK S K K K K +DPNAPKRP TAFFLFM+DFR
Sbjct: 62 LEAQVVEKPTE-AKQKPAERKKGSSTEPKLKKAKKEKKGRDPNAPKRPPTAFFLFMDDFR 120
Query: 441 KAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTLETEADDAEGE 620
K YKEANPDSK VK VAKEGG +W MTDEEKK Y+DKAAELK E K LE++ + E +
Sbjct: 121 KEYKEANPDSKDVKKVAKEGGVRWKSMTDEEKKQYVDKAAELKAENDKALESDNAENEDD 180
Query: 621 AEDVSEKLVPEKEVEEASEK 680
SEK V + E+ + E+
Sbjct: 181 EGVSSEKEVADLELRDKEEE 200
>gi|147815109|emb|CAN61363.1| hypothetical protein [Vitis vinifera]
Length = 190
Score = 211 bits (536), Expect = 6e-053
Identities = 110/175 (62%), Positives = 131/175 (74%), Gaps = 7/175 (4%)
Frame = +3
Query: 99 RKRVEATAEDSAGPSLLRGKDGSAFARCDGCQKNVPVALISFHNCSLDAKIKTNLEAQVV 278
RKRVEA SL R +DGSAF RC+ C+K+VPV LI H+CSL+AKIK NLEAQVV
Sbjct: 7 RKRVEAETS-----SLKRARDGSAFIRCEECKKDVPVVLIDMHSCSLEAKIKLNLEAQVV 61
Query: 279 EKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEA 458
EK ++V KK P E+K ++ K K+ ++ K KDPN PKRP TAFFLFM+DFRK YKE+
Sbjct: 62 EKVTDV-KKKPAEKKNATTTEPKPKKSRRLRKVKDPNMPKRPPTAFFLFMDDFRKEYKES 120
Query: 459 NPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTLET-EADDAEGE 620
NPDSK V +VAKEGGEKW MTDEEKKPY+DKAAELK EY K +ET A++ E E
Sbjct: 121 NPDSKNVSVVAKEGGEKWKSMTDEEKKPYVDKAAELKAEYDKAMETYNAENGEEE 175
>gi|116785888|gb|ABK23898.1| unknown [Picea sitchensis]
Length = 220
Score = 187 bits (474), Expect = 9e-046
Identities = 96/216 (44%), Positives = 133/216 (61%), Gaps = 9/216 (4%)
Frame = +3
Query: 72 SIKSNPTRSRKRVEATAEDSAGPSLLRGKDGSAFARCDGCQKNVPVALISFHNCSLDAKI 251
S K+NP R RKRV+ D A +L R +DGS F +CD C K++PVAL H+C L+ KI
Sbjct: 6 SSKTNPPRQRKRVDV---DPA--NLKRARDGSGFTKCDVCNKHIPVALSDMHDCQLEDKI 60
Query: 252 KTNLEAQVVEKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMN 431
++N +A K ++ K P ++ K + K K + K++DPN PK+P TAFF+FM+
Sbjct: 61 RSNFDASKETKHADAQKPPEAKKAKKKSADEKPKKRTREKKARDPNQPKKPATAFFVFMD 120
Query: 432 DFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTLETEADDA 611
DFRK YKE NPD KG V KEGG KW M+DE+KKPY++KAAELK EY+K + D
Sbjct: 121 DFRKTYKETNPDVKGAAQVGKEGGLKWKAMSDEDKKPYLEKAAELKAEYEKAMSKYQQDL 180
Query: 612 EGEA---EDVSEKLVPEKEVE-EASEKEVEEASDGE 707
+ EA D E V + + + + +++E DGE
Sbjct: 181 KDEAAKSSDGGEDEVAKSDADGDVNDEEANSNGDGE 216
>gi|157382898|gb|ABV48884.1| high mobility group protein B2 [Physcomitrella
patens]
Length = 165
Score = 121 bits (303), Expect = 6e-026
Identities = 69/151 (45%), Positives = 95/151 (62%), Gaps = 11/151 (7%)
Frame = +3
Query: 273 VVEKPSEVTKKPPTERK-KSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAY 449
V EK ++V K +RK +P +AK+ K K+KDPNAPKRP TAFF+F+N+FR+ +
Sbjct: 18 VKEKVTKVQDKDIKKRKGPVKEPKGGKAKSAK--KAKDPNAPKRPATAFFIFLNEFREVF 75
Query: 450 KEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL-------ETEADD 608
K+ NP+ KGV V K GGEKW M++ EK+PYM KA + K EY KTL + + +D
Sbjct: 76 KKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAVQKKSEYDKTLSAYNKKQDDDEED 135
Query: 609 AEGEAEDVSEKLVPEKEVEEASEKEVEEASD 701
E EAE+ S+K E +E E+E E+ D
Sbjct: 136 EEVEAEE-SDKSKSEINDDEEDEEEDEDLED 165
>gi|168028752|ref|XP_001766891.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 160
Score = 120 bits (299), Expect = 2e-025
Identities = 64/142 (45%), Positives = 89/142 (62%), Gaps = 7/142 (4%)
Frame = +3
Query: 273 VVEKPSEVTKKPPTERK-KSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAY 449
V EK ++V K +RK +P ++AK+ K K+KDPNAPKRP TAFF+F+N+FR+ +
Sbjct: 18 VKEKVTKVQDKDIKKRKGPVKEPKGRKAKSAK--KAKDPNAPKRPATAFFIFLNEFREVF 75
Query: 450 KEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL----ETEADDAEG 617
K+ NP+ KGV V K GGEKW M++ EK+PYM KA + K EY KTL + + DD E
Sbjct: 76 KKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAVQKKSEYDKTLSAYNKKQDDDEED 135
Query: 618 EAEDVSEKLVPEKEVEEASEKE 683
E + E + E+ + E E
Sbjct: 136 EEVEAEESDKSKSEINDDEEDE 157
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
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