BLASTX 7.6.2
Query= RU44932 /QuerySize=408
(407 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|148807168|gb|ABR13294.1| putative 40S ribosomal protein S8 [P... 201 1e-050
gi|17367479|sp|O81361.1|RS8_PRUAR RecName: Full=40S ribosomal pr... 198 1e-049
gi|147772691|emb|CAN64937.1| hypothetical protein [Vitis vinifera] 195 7e-049
gi|192913018|gb|ACF06617.1| 40S ribosomal protein S8 [Elaeis gui... 195 9e-049
gi|76573301|gb|ABA46755.1| unknown [Solanum tuberosum] 194 2e-048
>gi|148807168|gb|ABR13294.1| putative 40S ribosomal protein S8 [Prunus dulcis]
Length = 140
Score = 201 bits (510), Expect = 1e-050
Identities = 101/106 (95%)
Frame = +3
Query: 78 SATMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWR 257
S TMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWR
Sbjct: 25 SGTMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWR 84
Query: 258 ALRLDTGFFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLCLGAIV 395
ALRLDTG FSWGSEAVTRKTRLLDVVYNASNNELVRTQTL AIV
Sbjct: 85 ALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIV 130
>gi|17367479|sp|O81361.1|RS8_PRUAR RecName: Full=40S ribosomal protein S8
Length = 221
Score = 198 bits (501), Expect = 1e-049
Identities = 99/103 (96%)
Frame = +3
Query: 87 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 266
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 267 LDTGFFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLCLGAIV 395
LDTG FSWGSEAVTRKTRLLDVVYNASNNELVRTQTL AIV
Sbjct: 61 LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIV 103
>gi|147772691|emb|CAN64937.1| hypothetical protein [Vitis vinifera]
Length = 221
Score = 195 bits (495), Expect = 7e-049
Identities = 96/103 (93%), Positives = 99/103 (96%)
Frame = +3
Query: 87 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 266
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRR+RVRGGNVKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 267 LDTGFFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLCLGAIV 395
LDTG +SWGSEAVTRKTR+LDVVYNASNNELVRTQTL AIV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIV 103
>gi|192913018|gb|ACF06617.1| 40S ribosomal protein S8 [Elaeis guineensis]
Length = 224
Score = 195 bits (494), Expect = 9e-049
Identities = 95/103 (92%), Positives = 99/103 (96%)
Frame = +3
Query: 87 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 266
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRR+RVRGGNVKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 267 LDTGFFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLCLGAIV 395
LDTG +SWGSEAVTRKTR+LDVVYNASNNELVRTQTL AI+
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAII 103
>gi|76573301|gb|ABA46755.1| unknown [Solanum tuberosum]
Length = 224
Score = 194 bits (492), Expect = 2e-048
Identities = 95/103 (92%), Positives = 99/103 (96%)
Frame = +3
Query: 87 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 266
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLS+NKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSNNKTVRRIRVRGGNVKWRALR 60
Query: 267 LDTGFFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLCLGAIV 395
LDTG +SWGSEAVTRKTR+LDVVYNASNNELVRTQTL AI+
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAII 103
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
|