BLASTX 7.6.2
Query= RU44942 /QuerySize=421
(420 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157338447|emb|CAO39491.1| unnamed protein product [Vitis vini... 211 2e-053
gi|42572435|ref|NP_974313.1| PHD finger family protein [Arabidop... 195 1e-048
gi|18400507|ref|NP_566491.1| PHD finger family protein [Arabidop... 195 1e-048
gi|125524694|gb|EAY72808.1| hypothetical protein OsI_000655 [Ory... 171 1e-041
gi|125569301|gb|EAZ10816.1| hypothetical protein OsJ_000641 [Ory... 169 5e-041
>gi|157338447|emb|CAO39491.1| unnamed protein product [Vitis vinifera]
Length = 347
Score = 211 bits (535), Expect = 2e-053
Identities = 95/129 (73%), Positives = 109/129 (84%), Gaps = 2/129 (1%)
Frame = +2
Query: 35 NASEKSPEDLGGEEECEDEDEDGIVCAVCKSTDGDPSDPIVFCDGCDLMVHATCYGNPLV 214
N S ++ + G EE E+E++DGI CAVC+STDGDPSDPIVFCDGCDLMVHATCYGNPLV
Sbjct: 126 NGSGQTFVETGREEGEEEEEDDGIECAVCQSTDGDPSDPIVFCDGCDLMVHATCYGNPLV 185
Query: 215 KGIPEGDWFCLQCSG--SSEASQSNESFSCCLCPGKGGAMKPTGDGRWAHIVCALYVPEV 388
KG+PEGDWFC QC G SS+ ++ ++FSCCLCP GGAMKPT DGRWAHIVCAL VPEV
Sbjct: 186 KGVPEGDWFCNQCLGSHSSQNKKNPKAFSCCLCPNTGGAMKPTEDGRWAHIVCALLVPEV 245
Query: 389 FFKDPEGRE 415
FFKDPEGR+
Sbjct: 246 FFKDPEGRD 254
>gi|42572435|ref|NP_974313.1| PHD finger family protein [Arabidopsis thaliana]
Length = 343
Score = 195 bits (493), Expect = 1e-048
Identities = 86/112 (76%), Positives = 94/112 (83%), Gaps = 3/112 (2%)
Frame = +2
Query: 83 EDEDEDGIVCAVCKSTDGDPSDPIVFCDGCDLMVHATCYGNPLVKGIPEGDWFCLQCSGS 262
E EDEDGI+CAVC+STDGDP +PIVFCDGCDLMVHA+CYGNPLVK IPEGDWFC QC S
Sbjct: 144 EVEDEDGIMCAVCQSTDGDPLNPIVFCDGCDLMVHASCYGNPLVKAIPEGDWFCRQCLSS 203
Query: 263 SEASQSNESFSCCLCPGKGGAMKPTGDGRWAHIVCALYVPEVFFKDPEGREG 418
+ FSCCLC KGGAMKPT DGRWAHI CAL+VPEV+F+DPEGREG
Sbjct: 204 ---KNREKIFSCCLCTTKGGAMKPTNDGRWAHITCALFVPEVYFEDPEGREG 252
>gi|18400507|ref|NP_566491.1| PHD finger family protein [Arabidopsis thaliana]
Length = 341
Score = 195 bits (493), Expect = 1e-048
Identities = 86/112 (76%), Positives = 94/112 (83%), Gaps = 3/112 (2%)
Frame = +2
Query: 83 EDEDEDGIVCAVCKSTDGDPSDPIVFCDGCDLMVHATCYGNPLVKGIPEGDWFCLQCSGS 262
E EDEDGI+CAVC+STDGDP +PIVFCDGCDLMVHA+CYGNPLVK IPEGDWFC QC S
Sbjct: 144 EVEDEDGIMCAVCQSTDGDPLNPIVFCDGCDLMVHASCYGNPLVKAIPEGDWFCRQCLSS 203
Query: 263 SEASQSNESFSCCLCPGKGGAMKPTGDGRWAHIVCALYVPEVFFKDPEGREG 418
+ FSCCLC KGGAMKPT DGRWAHI CAL+VPEV+F+DPEGREG
Sbjct: 204 ---KNREKIFSCCLCTTKGGAMKPTNDGRWAHITCALFVPEVYFEDPEGREG 252
>gi|125524694|gb|EAY72808.1| hypothetical protein OsI_000655 [Oryza sativa
(indica cultivar-group)]
Length = 606
Score = 171 bits (433), Expect = 1e-041
Identities = 80/134 (59%), Positives = 97/134 (72%), Gaps = 6/134 (4%)
Frame = +2
Query: 20 EGVCENASEKSPEDLGGEEECEDEDEDGIVCAVCKSTDGDPSDPIVFCDGCDLMVHATCY 199
E V ++++ EEE E+ED DG+ CAVC STDGDPSDPIVFCDGCDLMVHA+CY
Sbjct: 378 ERVAREPTQEAMAAAAEEEEVEEED-DGVHCAVCGSTDGDPSDPIVFCDGCDLMVHASCY 436
Query: 200 GNPLVKGIPEGDWFCLQC-SGSSEASQSNE----SFSCCLCPGKGGAMKPTGDGRWAHIV 364
GNPL IP+GDWFC C + +++ S+ N+ CCLCP +GGAMK T D RWAHI
Sbjct: 437 GNPLTSSIPDGDWFCSVCTAAAAKKSKGNKPPPPPPRCCLCPARGGAMKRTTDARWAHIA 496
Query: 365 CALYVPEVFFKDPE 406
CAL VPEVFF+DP+
Sbjct: 497 CALLVPEVFFRDPD 510
>gi|125569301|gb|EAZ10816.1| hypothetical protein OsJ_000641 [Oryza sativa
(japonica cultivar-group)]
Length = 607
Score = 169 bits (427), Expect = 5e-041
Identities = 78/117 (66%), Positives = 91/117 (77%), Gaps = 6/117 (5%)
Frame = +2
Query: 71 EEECEDEDEDGIVCAVCKSTDGDPSDPIVFCDGCDLMVHATCYGNPLVKGIPEGDWFCLQ 250
EEE E+ED DG+ CAVC STDGDPSDPIVFCDGCDLMVHA+CYGNPL IP+GDWFC
Sbjct: 396 EEEVEEED-DGVHCAVCGSTDGDPSDPIVFCDGCDLMVHASCYGNPLASFIPDGDWFCSV 454
Query: 251 C-SGSSEASQSNE----SFSCCLCPGKGGAMKPTGDGRWAHIVCALYVPEVFFKDPE 406
C + +++ S+ N+ CCLCP +GGAMK T D RWAHI CAL VPEVFF+DP+
Sbjct: 455 CTAAAAKKSKGNKPPPPPPRCCLCPARGGAMKRTTDARWAHIACALLVPEVFFRDPD 511
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
|