BLASTX 7.6.2
Query= RU44963 /QuerySize=450
(449 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|3157933|gb|AAC17616.1| Contains similarity to box helicases g... 161 2e-038
gi|186478394|ref|NP_172659.3| transcription factor [Arabidopsis ... 161 2e-038
gi|157360437|emb|CAO69660.1| unnamed protein product [Vitis vini... 156 6e-037
gi|157352609|emb|CAO44407.1| unnamed protein product [Vitis vini... 143 3e-033
gi|115443729|ref|NP_001045644.1| Os02g0109400 [Oryza sativa (jap... 143 5e-033
>gi|3157933|gb|AAC17616.1| Contains similarity to box helicases gb|U29097 from
C. elegans and to the ENBP1 gene product gb|X95995 from Vicia sativa.
[Arabidopsis thaliana]
Length = 851
Score = 161 bits (405), Expect = 2e-038
Identities = 73/87 (83%), Positives = 83/87 (95%)
Frame = +2
Query: 2 EPWTFVQSLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTKDFRQLPKNHR 181
EPWTFVQ LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN+ ECLRLT +FRQLPKNH+
Sbjct: 761 EPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIDECLRLTDEFRQLPKNHK 820
Query: 182 AREDKLEIKKMILYAVDQAVKDLEALV 262
AREDKLEIKKM++YAV+QA+K++E L+
Sbjct: 821 AREDKLEIKKMVIYAVEQALKEVETLL 847
>gi|186478394|ref|NP_172659.3| transcription factor [Arabidopsis thaliana]
Length = 875
Score = 161 bits (405), Expect = 2e-038
Identities = 73/87 (83%), Positives = 83/87 (95%)
Frame = +2
Query: 2 EPWTFVQSLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTKDFRQLPKNHR 181
EPWTFVQ LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN+ ECLRLT +FRQLPKNH+
Sbjct: 785 EPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIDECLRLTDEFRQLPKNHK 844
Query: 182 AREDKLEIKKMILYAVDQAVKDLEALV 262
AREDKLEIKKM++YAV+QA+K++E L+
Sbjct: 845 AREDKLEIKKMVIYAVEQALKEVETLL 871
>gi|157360437|emb|CAO69660.1| unnamed protein product [Vitis vinifera]
Length = 695
Score = 156 bits (392), Expect = 6e-037
Identities = 71/88 (80%), Positives = 80/88 (90%)
Frame = +2
Query: 2 EPWTFVQSLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTKDFRQLPKNHR 181
EPWTF Q +GEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN+HEC+RLT++FRQLPKNHR
Sbjct: 607 EPWTFEQRIGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECIRLTEEFRQLPKNHR 666
Query: 182 AREDKLEIKKMILYAVDQAVKDLEALVA 265
REDKLEIKKMI+YAV Q++KD L +
Sbjct: 667 VREDKLEIKKMIVYAVAQSLKDFYLLAS 694
>gi|157352609|emb|CAO44407.1| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 143 bits (360), Expect = 3e-033
Identities = 65/83 (78%), Positives = 77/83 (92%)
Frame = +2
Query: 2 EPWTFVQSLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTKDFRQLPKNHR 181
EPWTFVQ+LG+AVFIPAGCPHQVRNLKSC KVAVDFVSPENV EC+RLT++FR LP+NHR
Sbjct: 964 EPWTFVQNLGDAVFIPAGCPHQVRNLKSCIKVAVDFVSPENVGECVRLTEEFRTLPQNHR 1023
Query: 182 AREDKLEIKKMILYAVDQAVKDL 250
A+EDKLE+KKM+++AV A+K L
Sbjct: 1024 AKEDKLEVKKMVIHAVYNALKTL 1046
>gi|115443729|ref|NP_001045644.1| Os02g0109400 [Oryza sativa (japonica
cultivar-group)]
Length = 997
Score = 143 bits (358), Expect = 5e-033
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +2
Query: 2 EPWTFVQSLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTKDFRQLPKNHR 181
EPWTF Q LGEAVFIPAGCPHQVRNLKSC KVA+DFVSPENV EC+RLT++FR LPK HR
Sbjct: 892 EPWTFEQKLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENVQECIRLTEEFRLLPKGHR 951
Query: 182 AREDKLEIKKMILYAVDQAVKDL 250
EDKLE+KK+ LYA+DQA+ D+
Sbjct: 952 VNEDKLEVKKIALYALDQAIDDI 974
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
|