BLASTX 7.6.2
Query= RU45242 /QuerySize=413
(412 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18391073|ref|NP_563854.1| POLD4; delta DNA polymerase [Arabid... 132 7e-030
gi|21594051|gb|AAM65969.1| unknown [Arabidopsis thaliana] 131 2e-029
gi|118488437|gb|ABK96033.1| unknown [Populus trichocarpa] 119 5e-026
gi|118482739|gb|ABK93288.1| unknown [Populus trichocarpa] 117 3e-025
gi|115480205|ref|NP_001063696.1| Os09g0520100 [Oryza sativa (jap... 102 8e-021
>gi|18391073|ref|NP_563854.1| POLD4; delta DNA polymerase [Arabidopsis
thaliana]
Length = 124
Score = 132 bits (331), Expect = 7e-030
Identities = 63/107 (58%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
Frame = +3
Query: 96 RALYQQKKSTPAGGISQKKKTQGASA---AASLGSDVTQPSALISHGAPDLKDDYDEQEE 266
+ Y+Q KS GGIS+ K + A AA+ GSDVTQP+ALISHG+ DL +DYD++EE
Sbjct: 9 KGFYKQTKSNITGGISKSKPSSRKVAPKHAAAQGSDVTQPAALISHGSVDLNEDYDKEEE 68
Query: 267 VLRQFDLNTAYGPCFGITRLARWERACKLGMDPPKEVESLLKSGKAR 407
+LRQFD+N YGPC G+TRL RWERA +LGM+PP E+E LLK+GK +
Sbjct: 69 MLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQ 115
>gi|21594051|gb|AAM65969.1| unknown [Arabidopsis thaliana]
Length = 124
Score = 131 bits (328), Expect = 2e-029
Identities = 62/107 (57%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
Frame = +3
Query: 96 RALYQQKKSTPAGGISQKKKTQGASA---AASLGSDVTQPSALISHGAPDLKDDYDEQEE 266
+ Y+Q KS GGIS+ K + A AA+ GSDVTQP+ALISHG+ DL +DYD++EE
Sbjct: 9 KGFYKQTKSNITGGISKSKPSSRKVAPKHAAAQGSDVTQPAALISHGSVDLNEDYDKEEE 68
Query: 267 VLRQFDLNTAYGPCFGITRLARWERACKLGMDPPKEVESLLKSGKAR 407
+LRQFD+N YGPC G+TRL RW+RA +LGM+PP E+E LLK+GK +
Sbjct: 69 MLRQFDMNITYGPCLGMTRLDRWQRAVRLGMNPPNEIEKLLKTGKVQ 115
>gi|118488437|gb|ABK96033.1| unknown [Populus trichocarpa]
Length = 122
Score = 119 bits (298), Expect = 5e-026
Identities = 58/102 (56%), Positives = 79/102 (77%), Gaps = 3/102 (2%)
Frame = +3
Query: 96 RALYQQKKSTPAGGISQKKKTQGASA--AASLGSDVTQPSALISHGAPDLKDDYDEQEEV 269
+ Y+QKK+ + GI++ ++ +S ASLGSD+TQP+A +SHG+PD KD YDE EE+
Sbjct: 9 KGFYRQKKNKNS-GITKPTSSKKSSLHHIASLGSDITQPTAQVSHGSPDHKDYYDEHEEL 67
Query: 270 LRQFDLNTAYGPCFGITRLARWERACKLGMDPPKEVESLLKS 395
LRQFD+N AYGPC G++RLARWERA +LG++PP E E LLK+
Sbjct: 68 LRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPNEFEGLLKA 109
>gi|118482739|gb|ABK93288.1| unknown [Populus trichocarpa]
Length = 122
Score = 117 bits (291), Expect = 3e-025
Identities = 57/102 (55%), Positives = 78/102 (76%), Gaps = 3/102 (2%)
Frame = +3
Query: 96 RALYQQKKSTPAGGISQKKKTQGASA--AASLGSDVTQPSALISHGAPDLKDDYDEQEEV 269
+ Y+QKK+ + GI++ ++ +S ASLGSD+TQP+A +SHG+PD KD YDE E +
Sbjct: 9 KGFYRQKKNKNS-GITKPTSSKKSSLHHIASLGSDITQPTAQVSHGSPDHKDYYDEHEGL 67
Query: 270 LRQFDLNTAYGPCFGITRLARWERACKLGMDPPKEVESLLKS 395
LRQFD+N AYGPC G++RLARWERA +LG++PP E E LLK+
Sbjct: 68 LRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPNEFEGLLKA 109
>gi|115480205|ref|NP_001063696.1| Os09g0520100 [Oryza sativa (japonica
cultivar-group)]
Length = 131
Score = 102 bits (253), Expect = 8e-021
Identities = 53/96 (55%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = +3
Query: 108 QQKKSTPA-GGISQKKKTQGASAAASLG-SDVTQPSALISHGAPDLKDDYDEQEEVLRQF 281
Q+KK P S KKKTQ + AS+G SD Q SALISHG DLKDD+ EQEE LR F
Sbjct: 12 QKKKGGPTKASSSSKKKTQHYTGGASVGASDTAQTSALISHGNLDLKDDFSEQEEQLRLF 71
Query: 282 DLNTAYGPCFGITRLARWERACKLGMDPPKEVESLL 389
D++ +GPC G+TRL RWERA +G+ PP + LL
Sbjct: 72 DMDMKFGPCIGVTRLQRWERASAMGLHPPPHLRDLL 107
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
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