BLASTX 7.6.2
Query= RU45578 /QuerySize=249
(248 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|2981133|gb|AAC06238.1| AGAMOUS homolog [Populus balsamifera s... 107 2e-022
gi|34921981|gb|AAQ83494.1| AGAMOUS [Populus yunnanensis] 107 2e-022
gi|116078101|dbj|BAF34914.1| MADS-box protein [Citrus unshiu] 107 4e-022
gi|34922017|gb|AAQ83498.1| AGAMOUS [Populus tomentosa] 106 5e-022
gi|58429207|gb|AAW78030.1| AGAMOUS-like protein [Thalictrum dioi... 106 9e-022
>gi|2981133|gb|AAC06238.1| AGAMOUS homolog [Populus balsamifera subsp.
trichocarpa]
Length = 238
Score = 107 bits (267), Expect = 2e-022
Identities = 54/68 (79%), Positives = 59/68 (86%)
Frame = +1
Query: 43 PNQS*VVERWGRGKD*DKGIENTTNRQVTFCKRRNGLLKKAYELSILCEAEVALIVFSSR 222
P +S + + GRGK K IENTTNRQVTFCKRRNGLLKKAYELS+LC+AEVALIVFSSR
Sbjct: 7 PQESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 66
Query: 223 GRLYEYSN 246
GRLYEYSN
Sbjct: 67 GRLYEYSN 74
>gi|34921981|gb|AAQ83494.1| AGAMOUS [Populus yunnanensis]
Length = 75
Score = 107 bits (267), Expect = 2e-022
Identities = 54/68 (79%), Positives = 59/68 (86%)
Frame = +1
Query: 43 PNQS*VVERWGRGKD*DKGIENTTNRQVTFCKRRNGLLKKAYELSILCEAEVALIVFSSR 222
P +S + + GRGK K IENTTNRQVTFCKRRNGLLKKAYELS+LC+AEVALIVFSSR
Sbjct: 7 PQESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 66
Query: 223 GRLYEYSN 246
GRLYEYSN
Sbjct: 67 GRLYEYSN 74
>gi|116078101|dbj|BAF34914.1| MADS-box protein [Citrus unshiu]
Length = 257
Score = 107 bits (265), Expect = 4e-022
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = +1
Query: 40 NPNQS*VVERWGRGKD*DKGIENTTNRQVTFCKRRNGLLKKAYELSILCEAEVALIVFSS 219
NP S ++ GRGK K IENTTNRQVTFCKRRNGLLKKAYELS+LC+AEVALIVFSS
Sbjct: 17 NPESSSQSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 76
Query: 220 RGRLYEYSN 246
RGRLYEY+N
Sbjct: 77 RGRLYEYAN 85
>gi|34922017|gb|AAQ83498.1| AGAMOUS [Populus tomentosa]
Length = 75
Score = 106 bits (264), Expect = 5e-022
Identities = 54/68 (79%), Positives = 59/68 (86%)
Frame = +1
Query: 43 PNQS*VVERWGRGKD*DKGIENTTNRQVTFCKRRNGLLKKAYELSILCEAEVALIVFSSR 222
P +S + + GRGK K IENTTNRQVTFCKRRNGLLKKAYELS+LC+AEVALIVFSSR
Sbjct: 7 PLESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 66
Query: 223 GRLYEYSN 246
GRLYEYSN
Sbjct: 67 GRLYEYSN 74
>gi|58429207|gb|AAW78030.1| AGAMOUS-like protein [Thalictrum dioicum]
Length = 226
Score = 106 bits (262), Expect = 9e-022
Identities = 53/58 (91%), Positives = 54/58 (93%)
Frame = +1
Query: 73 GRGKD*DKGIENTTNRQVTFCKRRNGLLKKAYELSILCEAEVALIVFSSRGRLYEYSN 246
GRGK K IENTTNRQVTFCKRRNGLLKKAYELS+LCEAEVALIVFSSRGRLYEYSN
Sbjct: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCEAEVALIVFSSRGRLYEYSN 59
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
|