BLASTX 7.6.2
Query= RU45810 /QuerySize=183
(182 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|109505817|ref|XP_001072050.1| PREDICTED: similar to H3 histon... 77 4e-013
gi|194210872|ref|XP_001491472.2| PREDICTED: similar to histone H... 76 6e-013
gi|194210878|ref|XP_001491419.2| PREDICTED: similar to histone H... 76 6e-013
gi|126309066|ref|XP_001366176.1| PREDICTED: similar to histone p... 76 8e-013
gi|30061401|ref|NP_835734.1| histone cluster 2, H3c1 isoform 2 [... 75 2e-012
>gi|109505817|ref|XP_001072050.1| PREDICTED: similar to H3 histone, family 2
isoform 2 [Rattus norvegicus]
Length = 150
Score = 77 bits (188), Expect = 4e-013
Identities = 39/43 (90%)
Frame = -2
Query: 130 FFFFFFTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV 2
FF F MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV
Sbjct: 8 FFSAAFAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV 50
>gi|194210872|ref|XP_001491472.2| PREDICTED: similar to histone H3.2 [Equus
caballus]
Length = 234
Score = 76 bits (186), Expect = 6e-013
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = -2
Query: 127 FFFFFTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV 2
F F+ MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV
Sbjct: 93 FVFWLGMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV 134
>gi|194210878|ref|XP_001491419.2| PREDICTED: similar to histone H3.2 [Equus
caballus]
Length = 234
Score = 76 bits (186), Expect = 6e-013
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = -2
Query: 127 FFFFFTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV 2
F F+ MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV
Sbjct: 93 FVFWLGMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV 134
>gi|126309066|ref|XP_001366176.1| PREDICTED: similar to histone protein
Hist2h3c1 [Monodelphis domestica]
Length = 155
Score = 76 bits (185), Expect = 8e-013
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -2
Query: 121 FFFTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV 2
+ F MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV
Sbjct: 16 YLFVMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV 55
>gi|30061401|ref|NP_835734.1| histone cluster 2, H3c1 isoform 2 [Mus musculus]
Length = 181
Score = 75 bits (182), Expect = 2e-012
Identities = 37/38 (97%)
Frame = -2
Query: 115 FTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV 2
F MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV
Sbjct: 44 FAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGV 81
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,048,254,341
Number of Sequences: 7387702
Number of Extensions: 126048254341
Number of Successful Extensions: 46626747
Number of sequences better than 0.0: 0
|