BLASTX 7.6.2
Query= RU47885 /QuerySize=185
(184 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|84468444|dbj|BAE71305.1| putative DNA-damage-repair/toleratio... 94 2e-018
gi|18397039|ref|NP_566241.1| DRT102 (DNA-DAMAGE-REPAIR/TOLERATIO... 86 1e-015
gi|116778806|gb|ABK21005.1| unknown [Picea sitchensis] 80 3e-014
gi|195644790|gb|ACG41863.1| unknown [Zea mays] 69 1e-010
gi|109466126|ref|XP_001056056.1| PREDICTED: hypothetical protein... 66 6e-010
>gi|84468444|dbj|BAE71305.1| putative DNA-damage-repair/toleration protein
DRT102 [Trifolium pratense]
Length = 302
Score = 94 bits (233), Expect = 2e-018
Identities = 48/60 (80%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 LGTSSYYSIAADVGRRVSSSSSSASDVETRGLVACGTGVGVAIFANKFPGVFAATCLSPS 182
LGTSSYYS A+VGRRVS S SS+S E RGLVACGTG GV+IFANKFPGVFAATCL+PS
Sbjct: 39 LGTSSYYSAGAEVGRRVSQSISSSSP-EVRGLVACGTGAGVSIFANKFPGVFAATCLTPS 97
>gi|18397039|ref|NP_566241.1| DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2)
[Arabidopsis thaliana]
Length = 310
Score = 86 bits (210), Expect = 1e-015
Identities = 43/57 (75%), Positives = 48/57 (84%), Gaps = 4/57 (7%)
Frame = +3
Query: 6 GTSSYYSIAADVGRRVSSSSSSASDVETRGLVACGTGVGVAIFANKFPGVFAATCLS 176
G SSYYS ++VGRRVS+SSSS E RGLV CGTGVGVA+FANKFPGV+AATCLS
Sbjct: 44 GVSSYYSAGSEVGRRVSASSSS----EVRGLVCCGTGVGVAMFANKFPGVYAATCLS 96
>gi|116778806|gb|ABK21005.1| unknown [Picea sitchensis]
Length = 308
Score = 80 bits (197), Expect = 3e-014
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +3
Query: 3 LGTSSYYSIAADVGRRVSSSSSSASDVETRGLVACGTGVGVAIFANKFPGVFAATC 170
LGT YYS+ +VGRRVS + + + E +GLVACGTGVGV+IFANKFPGV++ TC
Sbjct: 41 LGTDKYYSVGEEVGRRVSEAQHNENQAEIKGLVACGTGVGVSIFANKFPGVYSVTC 96
>gi|195644790|gb|ACG41863.1| unknown [Zea mays]
Length = 307
Score = 69 bits (166), Expect = 1e-010
Identities = 33/60 (55%), Positives = 38/60 (63%)
Frame = +3
Query: 3 LGTSSYYSIAADVGRRVSSSSSSASDVETRGLVACGTGVGVAIFANKFPGVFAATCLSPS 182
LG YY+ AA V R VSS S E RG+V CGTG GV IFANK+P V+A C SP+
Sbjct: 40 LGVDKYYAAAAAVARHVSSPDSEPDAPEFRGVVVCGTGAGVCIFANKYPRVYATHCASPA 99
>gi|109466126|ref|XP_001056056.1| PREDICTED: hypothetical protein [Rattus
norvegicus]
Length = 82
Score = 66 bits (160), Expect = 6e-010
Identities = 37/55 (67%), Positives = 39/55 (70%)
Frame = -2
Query: 168 TWRRRLRGTCWRRSRRRRRCRRRRARGFRRRRRRRRRRRRGGRRRRRWSSRRRCR 4
+WR+R R RR RRRRR RRRR R RRRRRRRRRRRR RRRRR RRR R
Sbjct: 15 SWRQRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 69
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,291,856,144
Number of Sequences: 7387702
Number of Extensions: 132291856144
Number of Successful Extensions: 55119463
Number of sequences better than 0.0: 0
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