BLASTX 7.6.2
Query= RU53233 /QuerySize=205
(204 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157339275|emb|CAO43816.1| unnamed protein product [Vitis vini... 64 3e-009
gi|30526336|gb|AAP32310.1| putative FtsH protease [Lycopersicon ... 59 8e-008
gi|18401040|ref|NP_565616.1| FTSH4 (FtsH protease 4); ATP-depend... 56 6e-007
gi|62319043|dbj|BAD94171.1| FtsH like protease [Arabidopsis thal... 56 6e-007
>gi|157339275|emb|CAO43816.1| unnamed protein product [Vitis vinifera]
Length = 500
Score = 64 bits (154), Expect = 3e-009
Identities = 38/45 (84%), Positives = 40/45 (88%), Gaps = 2/45 (4%)
Frame = +2
Query: 14 TSQSKPVPPPSPPNAAQSAAAAAAAAAAAAATAAAKSKGMAPVGS 148
TSQS PV PPS PNAA S AAAAAAAAAAAATAAAK+KG+APVGS
Sbjct: 458 TSQSNPV-PPSTPNAAAS-AAAAAAAAAAAATAAAKAKGIAPVGS 500
>gi|30526336|gb|AAP32310.1| putative FtsH protease [Lycopersicon esculentum]
Length = 714
Score = 59 bits (142), Expect = 8e-008
Identities = 34/48 (70%), Positives = 37/48 (77%), Gaps = 4/48 (8%)
Frame = +2
Query: 5 VAETSQSKPVPPPSPPNAAQSAAAAAAAAAAAAATAAAKSKGMAPVGS 148
V T QS P PP SP +AAAAAAAAAAAAATAAAK+KG+APVGS
Sbjct: 671 VESTPQSNPRPPQSP----SAAAAAAAAAAAAAATAAAKTKGIAPVGS 714
>gi|18401040|ref|NP_565616.1| FTSH4 (FtsH protease 4); ATP-dependent peptidase/
ATPase/ metallopeptidase [Arabidopsis thaliana]
Length = 717
Score = 56 bits (134), Expect = 6e-007
Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Frame = +2
Query: 14 TSQSKPVPPPSP---PNAAQSAAAAAAAAAAAAATAAAKSKGMAPV 142
T QS PVPP +P +AA +AAAAAAAAAAAAATAA K K MAPV
Sbjct: 671 TKQSNPVPPSTPSSASSAAAAAAAAAAAAAAAAATAATKGKDMAPV 716
>gi|62319043|dbj|BAD94171.1| FtsH like protease [Arabidopsis thaliana]
Length = 52
Score = 56 bits (134), Expect = 6e-007
Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Frame = +2
Query: 14 TSQSKPVPPPSP---PNAAQSAAAAAAAAAAAAATAAAKSKGMAPV 142
T QS PVPP +P +AA +AAAAAAAAAAAAATAA K K MAPV
Sbjct: 6 TKQSNPVPPSTPSSASSAAAAAAAAAAAAAAAAATAATKGKDMAPV 51
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,884,949,690
Number of Sequences: 7387702
Number of Extensions: 219884949690
Number of Successful Extensions: 91935933
Number of sequences better than 0.0: 0
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