BLASTX 7.6.2
Query= RU53916 /QuerySize=237
(236 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18416749|ref|NP_567746.1| CSN6B (COP9 SIGNALOSOME SUBUNIT 6B)... 67 3e-010
gi|2982463|emb|CAA18227.1| putative protein [Arabidopsis thaliana] 67 3e-010
gi|17940314|gb|AAL49561.1|AF434762_1 COP9 signalosome subunit 6 ... 67 3e-010
gi|9758401|dbj|BAB08872.1| transcription factor-like; similar to... 67 5e-010
gi|18423847|ref|NP_568839.1| CSN6A (COP9 SIGNALOSOME SUBUNIT 6A)... 67 5e-010
>gi|18416749|ref|NP_567746.1| CSN6B (COP9 SIGNALOSOME SUBUNIT 6B) [Arabidopsis
thaliana]
Length = 317
Score = 67 bits (163), Expect = 3e-010
Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 6/57 (10%)
Frame = +3
Query: 57 MAESSSSGLTFKLHPLVMVNISDHYSRVKSQMNPPIAAHNATATTTTTTTNNGAEAI 227
MA SSSSGLTFKLHPLVM+NISDH++RVK+Q+NPP A+ T +N A+A+
Sbjct: 1 MAPSSSSGLTFKLHPLVMLNISDHFTRVKTQLNPP------AASCATGNGSNNADAM 51
>gi|2982463|emb|CAA18227.1| putative protein [Arabidopsis thaliana]
Length = 286
Score = 67 bits (163), Expect = 3e-010
Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 6/57 (10%)
Frame = +3
Query: 57 MAESSSSGLTFKLHPLVMVNISDHYSRVKSQMNPPIAAHNATATTTTTTTNNGAEAI 227
MA SSSSGLTFKLHPLVM+NISDH++RVK+Q+NPP A+ T +N A+A+
Sbjct: 1 MAPSSSSGLTFKLHPLVMLNISDHFTRVKTQLNPP------AASCATGNGSNNADAM 51
>gi|17940314|gb|AAL49561.1|AF434762_1 COP9 signalosome subunit 6 [Arabidopsis
thaliana]
Length = 318
Score = 67 bits (163), Expect = 3e-010
Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 6/57 (10%)
Frame = +3
Query: 57 MAESSSSGLTFKLHPLVMVNISDHYSRVKSQMNPPIAAHNATATTTTTTTNNGAEAI 227
MA SSSSGLTFKLHPLVM+NISDH++RVK+Q+NPP A+ T +N A+A+
Sbjct: 1 MAPSSSSGLTFKLHPLVMLNISDHFTRVKTQLNPP------AASCATGNGSNNADAM 51
>gi|9758401|dbj|BAB08872.1| transcription factor-like; similar to CH6 and COP9
complex subunit 6 [Arabidopsis thaliana]
Length = 286
Score = 67 bits (161), Expect = 5e-010
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 5/53 (9%)
Frame = +3
Query: 57 MAESSSSGLTFKLHPLVMVNISDHYSRVKSQMNPPIAAHNATATTTTTTTNNG 215
MA SSSSGLTFKLHPLV+VNISDHY+RVK+Q+NPP A+ + +NNG
Sbjct: 1 MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPP-----ASICASGHGSNNG 48
>gi|18423847|ref|NP_568839.1| CSN6A (COP9 SIGNALOSOME SUBUNIT 6A) [Arabidopsis
thaliana]
Length = 317
Score = 67 bits (161), Expect = 5e-010
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 5/53 (9%)
Frame = +3
Query: 57 MAESSSSGLTFKLHPLVMVNISDHYSRVKSQMNPPIAAHNATATTTTTTTNNG 215
MA SSSSGLTFKLHPLV+VNISDHY+RVK+Q+NPP A+ + +NNG
Sbjct: 1 MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPP-----ASICASGHGSNNG 48
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,884,949,690
Number of Sequences: 7387702
Number of Extensions: 219884949690
Number of Successful Extensions: 91935933
Number of sequences better than 0.0: 0
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