BLASTX 7.6.2
Query= RU55478 /QuerySize=236
(235 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|149247206|ref|XP_906188.3| PREDICTED: hypothetical protein [M... 57 3e-007
gi|33086672|gb|AAP92648.1| Cc2-27 [Rattus norvegicus] 55 2e-006
gi|109501910|ref|XP_001081106.1| PREDICTED: hypothetical protein... 55 2e-006
gi|126310218|ref|XP_001370064.1| PREDICTED: hypothetical protein... 55 2e-006
>gi|149247206|ref|XP_906188.3| PREDICTED: hypothetical protein [Mus musculus]
Length = 154
Score = 57 bits (137), Expect = 3e-007
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Frame = +3
Query: 6 PEDAMSLVESEFSKDRNPNQVPPEVDDKIQTHGKNKAAEDCLSQLEVEEEEEEEEEEEEE 185
PE SL RNP P+ K + K K E+ + E EEEEEEEEEEEEE
Sbjct: 24 PEQKWSL------SQRNPVSKKPKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEEEEEEE 77
Query: 186 DDDDDERSKKKKKKK 230
++++++ KKKKKKK
Sbjct: 78 EEEEEKEKKKKKKKK 92
>gi|33086672|gb|AAP92648.1| Cc2-27 [Rattus norvegicus]
Length = 1089
Score = 55 bits (130), Expect = 2e-006
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +3
Query: 99 HGKNKAAEDCLSQLEVEEEEEEEEEEEEEDDDDDERSKKKKKKK 230
HG E+ + E EEEEEEEEEEEEE+++++E+ KKKKKKK
Sbjct: 667 HGGRGGKEEXEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 710
>gi|109501910|ref|XP_001081106.1| PREDICTED: hypothetical protein [Rattus
norvegicus]
Length = 158
Score = 55 bits (130), Expect = 2e-006
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +3
Query: 30 ESEFSKDRNPNQVPPEVDDKIQTHGKNKAAEDCLSQLEVEEEEEEEEEEEEEDDDDDERS 209
E E ++ + E +++ + + + E+ + E EEEEEEEEEEEEE+++++E+
Sbjct: 48 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKK 107
Query: 210 KKKKKKK 230
KKKKKKK
Sbjct: 108 KKKKKKK 114
>gi|126310218|ref|XP_001370064.1| PREDICTED: hypothetical protein [Monodelphis
domestica]
Length = 138
Score = 55 bits (130), Expect = 2e-006
Identities = 27/68 (39%), Positives = 43/68 (63%)
Frame = +3
Query: 27 VESEFSKDRNPNQVPPEVDDKIQTHGKNKAAEDCLSQLEVEEEEEEEEEEEEEDDDDDER 206
V+S K+ + E +++ + + + E+ + E EEEEEEEEEEEEE+++D+E
Sbjct: 44 VKSSPEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEE 103
Query: 207 SKKKKKKK 230
+KKKKKK
Sbjct: 104 EEKKKKKK 111
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,884,949,690
Number of Sequences: 7387702
Number of Extensions: 219884949690
Number of Successful Extensions: 91935933
Number of sequences better than 0.0: 0
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