BLASTX 7.6.2
Query= RU55822 /QuerySize=226
(225 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|70922224|ref|XP_734312.1| hypothetical protein [Plasmodium ch... 64 4e-009
gi|149045745|gb|EDL98745.1| rCG54974 [Rattus norvegicus] 61 2e-008
gi|170574983|ref|XP_001893046.1| T-cell receptor beta chain ANA ... 60 6e-008
gi|170572343|ref|XP_001892072.1| T-cell receptor beta chain ANA ... 59 7e-008
>gi|70922224|ref|XP_734312.1| hypothetical protein [Plasmodium chabaudi
chabaudi]
Length = 104
Score = 64 bits (153), Expect = 4e-009
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 8/41 (19%)
Frame = +2
Query: 86 LYICMYVCACVCVCVCMYVCTY--------VCVCRYVCMYL 184
+YIC+YVC CVC+CVCMYVC Y VCVC YVCM L
Sbjct: 21 MYICVYVCVCVCMCVCMYVCVYAYVCMYVCVCVCMYVCMRL 61
>gi|149045745|gb|EDL98745.1| rCG54974 [Rattus norvegicus]
Length = 41
Score = 61 bits (147), Expect = 2e-008
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +2
Query: 92 ICMYVCACVCVCVCMYVCTYVCVCRYVCM 178
+C+YVC CVC+CVC+Y+C YVCVC +VCM
Sbjct: 1 MCVYVCICVCMCVCVYICVYVCVCMHVCM 29
Score = 59 bits (142), Expect = 7e-008
Identities = 20/27 (74%), Positives = 26/27 (96%)
Frame = +1
Query: 94 MYVCVCVCMCVCMYVCMYVCVCV*VCM 174
+YVC+CVCMCVC+Y+C+YVCVC+ VCM
Sbjct: 3 VYVCICVCMCVCVYICVYVCVCMHVCM 29
>gi|170574983|ref|XP_001893046.1| T-cell receptor beta chain ANA 11 [Brugia
malayi]
Length = 97
Score = 60 bits (143), Expect = 6e-008
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -2
Query: 182 NTYIHTYTHTHTYIHTYIHTHIHTHTHTYICIKTL 78
+T+ HTYTHTHT+ HT+IHTH HT THTYI I L
Sbjct: 46 HTHTHTYTHTHTHTHTHIHTHTHTQTHTYIHIHLL 80
>gi|170572343|ref|XP_001892072.1| T-cell receptor beta chain ANA 11 [Brugia
malayi]
Length = 90
Score = 59 bits (142), Expect = 7e-008
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = -1
Query: 180 YIHTYLHTHTYVHTYIHTHTHTHAHTYIHMY 88
+ HT+ HTHT+ HT+ HTHTHTH HTYIH Y
Sbjct: 36 HTHTHTHTHTHTHTHTHTHTHTHTHTYIHTY 66
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,884,949,690
Number of Sequences: 7387702
Number of Extensions: 219884949690
Number of Successful Extensions: 91935933
Number of sequences better than 0.0: 0
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