BLASTX 7.6.2
Query= RU57688 /QuerySize=241
(240 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157342707|emb|CAO65419.1| unnamed protein product [Vitis vini... 101 3e-020
gi|15224841|ref|NP_179569.1| clathrin adaptor complex small chai... 99 6e-020
gi|118483077|gb|ABK93448.1| unknown [Populus trichocarpa] 99 6e-020
gi|40253273|dbj|BAD05209.1| putative clathrin coat assembly prot... 91 2e-017
gi|168066797|ref|XP_001785318.1| predicted protein [Physcomitrel... 91 2e-017
>gi|157342707|emb|CAO65419.1| unnamed protein product [Vitis vinifera]
Length = 143
Score = 101 bits (249), Expect = 3e-020
Identities = 49/51 (96%)
Frame = +3
Query: 87 MGIRFILMVNKQGQTRLAQYYEYLTLEERRALEAEIVRKCLARNEQQCSFV 239
MGIRFILMVNKQGQTRLAQYYEYL LEERRALE EIVRKCLARNEQQCSFV
Sbjct: 1 MGIRFILMVNKQGQTRLAQYYEYLNLEERRALEGEIVRKCLARNEQQCSFV 51
>gi|15224841|ref|NP_179569.1| clathrin adaptor complex small chain family
protein [Arabidopsis thaliana]
Length = 143
Score = 99 bits (246), Expect = 6e-020
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3
Query: 87 MGIRFILMVNKQGQTRLAQYYEYLTLEERRALEAEIVRKCLARNEQQCSFV 239
MGIRFILMVNKQGQTRLAQYYE+LTLEERRALE EIVRKCLARN+QQCSFV
Sbjct: 1 MGIRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFV 51
>gi|118483077|gb|ABK93448.1| unknown [Populus trichocarpa]
Length = 96
Score = 99 bits (246), Expect = 6e-020
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3
Query: 87 MGIRFILMVNKQGQTRLAQYYEYLTLEERRALEAEIVRKCLARNEQQCSFV 239
MGIRFILMVNKQGQTRLAQYYE+LTLEERRALE EIVRKCLARN+QQCSFV
Sbjct: 1 MGIRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFV 51
>gi|40253273|dbj|BAD05209.1| putative clathrin coat assembly protein AP17 [Oryza
sativa Japonica Group]
Length = 143
Score = 91 bits (225), Expect = 2e-017
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +3
Query: 87 MGIRFILMVNKQGQTRLAQYYEYLTLEERRALEAEIVRKCLARNEQQCSFV 239
MGIRF+L VNKQGQTRLAQYYE+L+++ERRALE EIVRKCLAR +QQCSFV
Sbjct: 1 MGIRFVLFVNKQGQTRLAQYYEHLSIDERRALEGEIVRKCLARTDQQCSFV 51
>gi|168066797|ref|XP_001785318.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 143
Score = 91 bits (224), Expect = 2e-017
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = +3
Query: 87 MGIRFILMVNKQGQTRLAQYYEYLTLEERRALEAEIVRKCLARNEQQCSFV 239
M IRF+L+VNKQGQTRLAQYYEYLT+EERRALE EIVRKCLAR + QCSFV
Sbjct: 1 MTIRFVLLVNKQGQTRLAQYYEYLTIEERRALEGEIVRKCLARPDNQCSFV 51
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 232,580,576,361
Number of Sequences: 7387702
Number of Extensions: 232580576361
Number of Successful Extensions: 108796664
Number of sequences better than 0.0: 0
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